PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Oeu055809.1
Organism
Olea europaea var. sylvestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea
Family bHLH
Protein Properties Length: 112aa    MW: 12823.6 Da    PI: 9.8698
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Oeu055809.1genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH407e-1361106655
                  HHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
          HLH   6 nerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                  +++Er RR ri +++ +L+el+P+      +  + +++L +Av+YIk+Lq
  Oeu055809.1  61 SIAERVRRTRISERMRKLQELVPNM----ERQTNTSDMLDLAVDYIKDLQ 106
                  689*********************6....4789****************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 112 aa     Download sequence    
MRKNNDAEQN SEDGNRPTTL LSHHLSLPSS TAEMSAMEKM WQESVPCKIR AKRGCATHPR  60
SIAERVRRTR ISERMRKLQE LVPNMERQTN TSDMLDLAVD YIKDLQTQVK V*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G42280.19e-44bHLH family protein