PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Oeu055811.1
Organism
Olea europaea var. sylvestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea
Family bHLH
Protein Properties Length: 376aa    MW: 41884.5 Da    PI: 8.7125
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Oeu055811.1genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH36.96.7e-12309354655
                  HHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
          HLH   6 nerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                  +++Er RR ri +++ +L+el+P+      +  + +++L +Av+YIk+Lq
  Oeu055811.1 309 SIAERVRRTRISERMRKLQELVPNM----ERQTNTSDMLDLAVDYIKDLQ 354
                  689*********************6....4789****************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 376 aa     Download sequence    
MNHHQHQQQQ IRQNTQMQQQ VGSGLKRYRS APSSYLTSLS DISSTSGGFE GDDFDQIFNA  60
RVSSPETQQI FERFMNSVDT IGHNYSSNMS LQSQSQSQFV QPIKNETDVH QPQQQLQKQK  120
SNDYSSASQM TYQTHSSGNA SSSMDNSFSR LHGSINSDRV AHMRMDGGVC SSNLIRQSSM  180
PAGLFDNVNI DNEFGAMRSL GNFEAGNSGR AEALSSSASR FKNQMVYPSM QRSSLGMMIP  240
ISEIGSKSIG ETRPDDQNSE DGNRPTTLLS HHLSLPSSTA EMSAMEKMWQ ESVPCKIRAK  300
RGCATHPRSI AERVRRTRIS ERMRKLQELV PNMERQTNTS DMLDLAVDYI KDLQTQVKTL  360
SDKHAKCSCS AKLKS*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G42280.13e-53bHLH family protein