PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Oeu055865.1
Organism
Olea europaea var. sylvestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea
Family Trihelix
Protein Properties Length: 318aa    MW: 37111.6 Da    PI: 4.2121
Description Trihelix family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Oeu055865.1genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1trihelix40.28.8e-1370152286
     trihelix   2 WtkqevlaLiearremeerlrrgklkkplWeevskkm.rergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqle 86 
                  W+++e  +L+e+  e+  +l+r++l+  +W ev++k+ +  g+er+  +C++ ++ l+++ykk++   +++   + s++++f++++
  Oeu055865.1  70 WSEEESFVLLEVWGERYMELGRRSLRTEDWVEVAEKVlEMSGVERTEMECRSQLDVLKNKYKKERVKVESG---HASKWAFFKKMD 152
                  ************************************96668***********************9988875...7789*******7 PP
Sequence ? help Back to Top
Protein Sequence    Length: 318 aa     Download sequence    
MRNSIPHSYS SQNEIEFDDN AFDEDEENPY QNVAENGQLY NYEESKRHPK KRKLESFVSN  60
YEFVPQNGMW SEEESFVLLE VWGERYMELG RRSLRTEDWV EVAEKVLEMS GVERTEMECR  120
SQLDVLKNKY KKERVKVESG HASKWAFFKK MDVLLNMRTR GHCGLGCGID SGEYVFMNPR  180
VYLDRSNLLD EMRDSPGQSD EEDGEEEELG DEEEGAESAK LLAESIQRFG EIYEKIEDSK  240
RKHMMELEKM RQDFQRELEL QKKQIVEHAQ AEIAKVRDMD DDDDSDDEDD EDDDNHNIDF  300
SGDNLRGDAG NLNSFIA*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G24490.16e-79Trihelix family protein