PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Oeu055995.1
Organism
Olea europaea var. sylvestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea
Family GRAS
Protein Properties Length: 468aa    MW: 52448 Da    PI: 8.255
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Oeu055995.1genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS1425.9e-441243061181
         GRAS   1 lvelLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvs..elykalppsetseknsseelaalklfsevsPilkfshl 96 
                  lv++L++cAeav+ +d++ a+ lL++l+ +a   g+++qR+a++f+++La rla  ++  ++   ++  +  e+  +++  al+l +e++P ++f+h+
  Oeu055995.1 124 LVQQLISCAEAVACRDKSHASFLLSELRANALVFGSSFQRVASCFVQGLADRLALVQPlgTVGYGMSKMNIVESGLERNDEALRLVYEICPHIQFGHF 221
                  689**************************************************984431133333444444444488888999*************** PP

         GRAS  97 taNqaIleavegeervHiiDfdis....qGlQWpaLlqaLasRpegppslRiTgvgspesgskeeleetgerLakfAeelgvpfefnvl 181
                  +aN+ Ilea+ege+ vH++D++++    +G QW  L+q+L +R+++ p+lRiTg+g+     +++l+++g+ L+ +A++lg+++++  l
  Oeu055995.1 222 VANSSILEAFEGESSVHVVDLGMTlglpHGYQWRRLIQSLVKRTRPLPRLRITGIGP----CAKKLQSIGNELEAYAQSLGLSLDILQL 306
                  ********************98763344788**************************....**********************998765 PP
2GRAS182.23.6e-56304466208374
         GRAS 208 lqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpreseerikvErellgreivnvvacegaer 305
                  lqlh +++es    +   +vL+++ +lsPkv+v+veq+++hn++ Fl rf+eal+yysa+fdsl+a lp+ + +r+k+E+ ++g+ei+n+v+ceg +r
  Oeu055995.1 304 LQLHCVVKESRGALN---SVLQIIHELSPKVLVLVEQDSSHNGPFFLGRFMEALHYYSAIFDSLDAMLPKYDTKRAKMEQLYFGEEIKNIVSCEGPAR 398
                  577877766665555...8******************************************************************************* PP

         GRAS 306 rerhetlekWrerleeaGFkpvplsekaakqaklllrkvk.sdgyrveeesgslvlgWkdrpLvsvSaWr 374
                  +erhe++ +Wr+r+++aGF+p++l+  + +qa++ l++++  +gy+v ee+g+lv+gWk++p+v++S+W+
  Oeu055995.1 399 IERHERVDQWRRRMSRAGFQPAQLK--MLTQARRWLNNINaTEGYTVVEEKGCLVMGWKSKPIVAASCWK 466
                  **********************996..799***************************************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 468 aa     Download sequence    
MAYSFFSEGS NSNRRKFPSK YSILPILEND TANWFPNLSD ESGDFKRLKR TTSVGEFIEN  60
NASSGSITRA KSTSSLSKLQ FRDHIWTYSQ RYLAAEAVEE AAAAIIRSED GEKEEKSNED  120
GMKLVQQLIS CAEAVACRDK SHASFLLSEL RANALVFGSS FQRVASCFVQ GLADRLALVQ  180
PLGTVGYGMS KMNIVESGLE RNDEALRLVY EICPHIQFGH FVANSSILEA FEGESSVHVV  240
DLGMTLGLPH GYQWRRLIQS LVKRTRPLPR LRITGIGPCA KKLQSIGNEL EAYAQSLGLS  300
LDILQLHCVV KESRGALNSV LQIIHELSPK VLVLVEQDSS HNGPFFLGRF MEALHYYSAI  360
FDSLDAMLPK YDTKRAKMEQ LYFGEEIKNI VSCEGPARIE RHERVDQWRR RMSRAGFQPA  420
QLKMLTQARR WLNNINATEG YTVVEEKGCL VMGWKSKPIV AASCWKC*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G14920.11e-73GRAS family protein