PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Oeu056097.1
Organism
Olea europaea var. sylvestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea
Family Dof
Protein Properties Length: 270aa    MW: 29524.1 Da    PI: 9.3938
Description Dof family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Oeu056097.1genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-Dof117.93.9e-372076662
       zf-Dof  6 lkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkkss 62
                  kcprCds ntkfCyynnyslsqPr+fCk+C+ryWt+GG++rnvPvGgg r+nk+++
  Oeu056097.1 20 FKCPRCDSINTKFCYYNNYSLSQPRHFCKSCKRYWTRGGTIRNVPVGGGFRRNKRVK 76
                 69****************************************************976 PP
Sequence ? help Back to Top
Protein Sequence    Length: 270 aa     Download sequence    
MSSTSCSVME KPSSHEQFLF KCPRCDSINT KFCYYNNYSL SQPRHFCKSC KRYWTRGGTI  60
RNVPVGGGFR RNKRVKREPQ SASIGGANPS SASNGATKTS TVQPNPLLYS QPTNPVELKF  120
SYPRNSHRIS GFNIQPHINV FSSALMASDH IQHSDCKNAY NSAEQIQDAI NPSSVLSSTS  180
IFASSTFAAT STLASLLPSS LHQQKIFSTG LKDIQEANNF SGLSPFADIQ AMNPIEQMNS  240
AYLSHLWNTT GVGTWLDPSS MASSVPYLI*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G28310.27e-35Dof family protein