PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Oeu056098.1
Organism
Olea europaea var. sylvestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea
Family SBP
Protein Properties Length: 134aa    MW: 15158.2 Da    PI: 7.7743
Description SBP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Oeu056098.1genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SBP1308.5e-4153128176
                  --SSTT-----TT--HHHHHTT--HHHHT-S-EEETTEEEEE-TTTSSEEETTT--SS--S-STTTT-------S- CS
          SBP   1 lCqvegCeadlseakeyhrrhkvCevhskapvvlvsgleqrfCqqCsrfhelsefDeekrsCrrrLakhnerrrkk 76 
                  +Cqv++C++d++ a+ yhrrhkvCe+hskap+vlv+gl+qrfCqqCsrfhe+sefDe krsCr rLa hnerrrk 
  Oeu056098.1  53 CCQVQDCTVDMAGARPYHRRHKVCEFHSKAPAVLVAGLQQRFCQQCSRFHEVSEFDEVKRSCRGRLAMHNERRRKI 128
                  6*************************************************************************96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 134 aa     Download sequence    
METSLAEVKR DAKEATLVKE EEDGEDEDDK YMKRALTLTT IRASSAGGSV QPCCQVQDCT  60
VDMAGARPYH RRHKVCEFHS KAPAVLVAGL QQRFCQQCSR FHEVSEFDEV KRSCRGRLAM  120
HNERRRKILN DSL*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G33810.13e-39SBP family protein