PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Oeu056156.1
Organism
Olea europaea var. sylvestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea
Family bHLH
Protein Properties Length: 207aa    MW: 23889.7 Da    PI: 10.2598
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Oeu056156.1genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH31.82.6e-103990255
                 HHHHHHHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHHH CS
          HLH  2 rrahnerErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksLq 55
                 +  h   E++RR+++++ ++ Lr+llP       ++K   ++   +Av+YIk++q
  Oeu056156.1 39 KLLHRDLEKQRRQEMKKLYASLRSLLPLeY---IKGKRAVSDHMLEAVNYIKDMQ 90
                 66799***********************77...99******************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 207 aa     Download sequence    
MDNHNFPIPT RSKKRQRKPS SGNQVKELDG ISAENKKKKL LHRDLEKQRR QEMKKLYASL  60
RSLLPLEYIK GKRAVSDHML EAVNYIKDMQ KSIKELSLRR DKQKKLYTSG SLCGEDENSN  120
INLLTNCVTV SPCREGFEIL INTSSKGELV PLSSVLVELV LRRLNVVSCV STRTNDRRFL  180
HRIQFEVQYI LRSCCFLLYD ISGQQF*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1101106DKQKKL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G25410.11e-29bHLH family protein