PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Oeu056162.1
Organism
Olea europaea var. sylvestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea
Family bHLH
Protein Properties Length: 223aa    MW: 25284.7 Da    PI: 7.3858
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Oeu056162.1genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH24.54.8e-0878128355
                  HHHHHHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHHH CS
          HLH   3 rahnerErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksLq 55 
                    h e Er+RR+++ + ++ Lr+llP       ++K    +   +A +Y+k++q
  Oeu056162.1  78 IPHREFERQRRKQMAKLYASLRSLLPLeY---IKGKRAVCDHMNEALNYVKDMQ 128
                  5699***********************77...9999999999999999999988 PP
Sequence ? help Back to Top
Protein Sequence    Length: 223 aa     Download sequence    
MFPSQSQDDP IFEDPSIFQE DIVNLEEYLI ADHQDSSVLT RNRSRANPKD TKKRQIKPSS  60
DDEENKEGVS AENKGKKIPH REFERQRRKQ MAKLYASLRS LLPLEYIKGK RAVCDHMNEA  120
LNYVKDMQKN IQEQSLCRDK LKNLYTSGSN SNLTPNSVTV SPCQDGVEVL IRTSSIEGGF  180
PLSRVLGELI RTNLNVVTAT VLMCIDLSAL RERLFNVINI DN*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G51790.16e-34bHLH family protein