PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Oeu056174.1

Organism

Olea europaea var. sylvestris

Taxonomic ID

158386

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea

Family

bHLH

Protein Properties

Length: 230aa MW: 26493.1 Da PI: 8.5928

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Oeu056174.1	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	27.8	4.5e-09	78	128	3	55
HHHHHHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHHH CS HLH 3 rahnerErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksLq 55 h e Er+RR+++ + ++ Lr+llP ++K + +A +YIk++q Oeu056174.1 78 IPHREFERQRRKQMAKLYASLRSLLPLeY---IKGKRAVCDHMNEAFNYIKDMQ 128 5699*********************77...9*****************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 230 aa Download sequence
MFPSQSQDDP IFEDPSIFQE DIVNLEEYLI ADHQDSSVLT RNRSRANPKD TKKRQIKPSS 60 DDEENKEGVS AENKGKKIPH REFERQRRKQ MAKLYASLRS LLPLEYIKGK RAVCDHMNEA 120 FNYIKDMQKN IQDQSLCRDK LKKLYTSGSN SNLTPNSVTV SPCQDGVEVL IRTFPLSRVL 180 GELIRTNLNV VSCVSTKTND QNFLHRIQFE VNIYMISPVL YIFTNTQIF*

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	139	144	DKLKKL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G51790.1	8e-38	bHLH family protein