PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Oeu056236.1
Organism
Olea europaea var. sylvestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea
Family HSF
Protein Properties Length: 338aa    MW: 37313.2 Da    PI: 4.6488
Description HSF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Oeu056236.1genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HSF_DNA-bind114.47.1e-36211112101
                   HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSEEEEESXXXXXXXXXXXXXX CS
  HSF_DNA-bind   2 FlkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiweFkhksFkkgkkellekik 98 
                   Fl+k+y++++d++++++isw+e+g++fvv++++efa+++LpkyFkh+nf+SFvRQLn+YgF+kv  ++         weF+++ F++++k ll++i+
   Oeu056236.1  21 FLTKTYQLVDDHTNDDVISWNEDGSTFVVWNPTEFARDLLPKYFKHNNFSSFVRQLNTYGFRKVVPDR---------WEFSNECFRRDEKMLLCDIQ 108
                   9*****************************************************************99.........******************** PP

                   XXX CS
  HSF_DNA-bind  99 rkk 101
                   r+k
   Oeu056236.1 109 RRK 111
                   *98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 338 aa     Download sequence    
MTPPPEGRNA GDSARTLPTP FLTKTYQLVD DHTNDDVISW NEDGSTFVVW NPTEFARDLL  60
PKYFKHNNFS SFVRQLNTYG FRKVVPDRWE FSNECFRRDE KMLLCDIQRR KIATLSSAVA  120
ATSLAAVTVA AAHPTPATTQ LRTESPSDSG EEQVLSSSNS AGAVLEFSGS TSELIGENER  180
LRKENMQLNK DLSDVKNLCN KIYHLMSNFS NCSSSNDQAA KPPDLLPSTG FCEEMEGVVT  240
ASAAPDGGEV NDIRSNAERL SARLIGMPMG VKRGREFDGT SADHDMDLQL QLQQPGTDVK  300
SELSDQNIGD DPETTWLRRC NSRNQGYFNM NGADHES*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G62020.13e-76HSF family protein