PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Oeu056305.1

Organism

Olea europaea var. sylvestris

Taxonomic ID

158386

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea

Family

ARF

Protein Properties

Length: 574aa MW: 63555.6 Da PI: 6.6493

Description

ARF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Oeu056305.1	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	58	1.8e-18	121	184	34	99
SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE-S CS B3 34 ktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfrk 99 +t++ +d +g+sW++++iyr++++r++lt+ W++Fv++++L +gD+vvF + ++++l+v+++r+ Oeu056305.1 121 RTVIAKDVHGESWKFRHIYRGTPRRHLLTTAWSNFVNQKKLIAGDSVVFL--RAENGNLCVGIRRA 184 38999*******************************************..449999****97 PP
2	Auxin_resp	94.7	1.5e-31	214	296	2	83
Auxin_resp 2 ahaastksvFevvYnPrastseFvvkvekvekalkvkvsvGmRfkmafetedsserrl.sGtvvgvsdldpvrWpnSkWrsLk 83 a +++++ Fe vY+Pra t+eF+v +++v++ +++++ +GmRfkmafetedss++++ +Gt+++v+ +dp+ WpnS W++L+ Oeu056305.1 214 AFLVANGQSFEAVYYPRANTAEFCVLASSVSAIMRIQWHAGMRFKMAFETEDSSRISWfTGTIASVQVADPICWPNSLWQLLQ 296 557899**************************************************************************997 PP

Sequence ? help Back to Top
Protein Sequence Length: 574 aa Download sequence
MNEEVEKTLD SELWHACAGG MVQIPPVNSK VVYFPQGHAE HTLINVDFGP LPRIPPLILC 60 RVAALKYLAD PETDEVYAKI RLIPIGNNMD NFDDEGLGSN GSESNGKPIS NDLSTADPPV 120 RTVIAKDVHG ESWKFRHIYR GTPRRHLLTT AWSNFVNQKK LIAGDSVVFL RAENGNLCVG 180 IRRAKKGCGI AGLGSNGNLR ERNRVSPESV LEAAFLVANG QSFEAVYYPR ANTAEFCVLA 240 SSVSAIMRIQ WHAGMRFKMA FETEDSSRIS WFTGTIASVQ VADPICWPNS LWQLLQKVSI 300 MRACLAQRLE HRICNAMVIA SIPIASRHVT WDEPDLLQNV KSVNPWLVEL VSNMPAIHLS 360 PFSPPRKRLC SPHHPDVSLN GEFPMPSFSG NPLGPNIPLR CLCDKQNGVS LSDLHLDNKL 420 QLGLLPSTYP CLDQQVKISD IVESDMDVMQ FQIYLHKSSL GQTPLKDDSL VLDRRSVPGS 480 FGLDAGHCKV FLESENVGQT LDLSLLGSYE ELYKRLENLF GFERSEMLSH VFYHDATGAV 540 KQAGQEPFSE FTTSAKRLTI LTMSGSNSAE RNF*

Sequence ? help Back to Top

Protein Sequence Length: 574 aa Download sequence

MNEEVEKTLD SELWHACAGG MVQIPPVNSK VVYFPQGHAE HTLINVDFGP LPRIPPLILC  60
RVAALKYLAD PETDEVYAKI RLIPIGNNMD NFDDEGLGSN GSESNGKPIS NDLSTADPPV  120
RTVIAKDVHG ESWKFRHIYR GTPRRHLLTT AWSNFVNQKK LIAGDSVVFL RAENGNLCVG  180
IRRAKKGCGI AGLGSNGNLR ERNRVSPESV LEAAFLVANG QSFEAVYYPR ANTAEFCVLA  240
SSVSAIMRIQ WHAGMRFKMA FETEDSSRIS WFTGTIASVQ VADPICWPNS LWQLLQKVSI  300
MRACLAQRLE HRICNAMVIA SIPIASRHVT WDEPDLLQNV KSVNPWLVEL VSNMPAIHLS  360
PFSPPRKRLC SPHHPDVSLN GEFPMPSFSG NPLGPNIPLR CLCDKQNGVS LSDLHLDNKL  420
QLGLLPSTYP CLDQQVKISD IVESDMDVMQ FQIYLHKSSL GQTPLKDDSL VLDRRSVPGS  480
FGLDAGHCKV FLESENVGQT LDLSLLGSYE ELYKRLENLF GFERSEMLSH VFYHDATGAV  540
KQAGQEPFSE FTTSAKRLTI LTMSGSNSAE RNF*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G30080.1	1e-179	ARF family protein