PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Oeu056501.1

Organism

Olea europaea var. sylvestris

Taxonomic ID

158386

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea

Family

HD-ZIP

Protein Properties

Length: 219aa MW: 24526.6 Da PI: 10.3497

Description

HD-ZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Oeu056501.1	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	58.1	1.5e-18	72	126	2	56
T--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS Homeobox 2 rkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 rk+ +++keq+ Le+ F+++ ++++ +++ LA++l+L+ rqV vWFqNrRa+ k Oeu056501.1 72 RKKLRLSKEQIFLLEDTFKQHTTLNTVQKQTLAERLNLKPRQVEVWFQNRRARTK 126 678899***********************************************98 PP
2	HD-ZIP_I/II	112.2	3.3e-36	72	163	1	92
HD-ZIP_I/II 1 ekkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreelk 92 +kk+rlskeq+ lLE++F+++++L++ +K++la++L+l+prqv+vWFqnrRARtk+kq+E+dye+Lk+++++l+een+rL+ke eL++++k Oeu056501.1 72 RKKLRLSKEQIFLLEDTFKQHTTLNTVQKQTLAERLNLKPRQVEVWFQNRRARTKLKQTEVDYEFLKKHFQRLSEENRRLNKELVELQSAVK 163 69**************************************************************************************9987 PP

Sequence ? help Back to Top
Protein Sequence Length: 219 aa Download sequence
MPKRDHDRKN KRVFFLDLSI PLHSSNHAIE GSGSGFGSGS SSLKVNFEDD KQASKDSVSN 60 GSKEDEDRNY GRKKLRLSKE QIFLLEDTFK QHTTLNTVQK QTLAERLNLK PRQVEVWFQN 120 RRARTKLKQT EVDYEFLKKH FQRLSEENRR LNKELVELQS AVKMEQTPST PLPFFIQVPK 180 AAATLTMCPS CEKVSKSRGG DGGKAGGGSG HTGGGPYT*

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	121	129	RRARTKLKQ
2	202	208	GGKAGGG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G06710.1	3e-49	HD-ZIP family protein