PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Oeu056520.3

Organism

Olea europaea var. sylvestris

Taxonomic ID

158386

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea

Family

HB-other

Protein Properties

Length: 1351aa MW: 152330 Da PI: 5.7336

Description

HB-other family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Oeu056520.3	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	60.2	3.3e-19	23	79	1	57
TT--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHHC CS Homeobox 1 rrkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakekk 57 r kR+ t+ qle+Le+ +++++yps+++re L++klgLt+rq ++WF+ rR k+kk Oeu056520.3 23 RPKRQMKTPFQLEVLEKTYAMEMYPSEATREGLSEKLGLTDRQLQMWFCHRRLKDKK 79 579****************************************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 1351 aa Download sequence
MDPDSEEEIN RNVNQSPPDG PKRPKRQMKT PFQLEVLEKT YAMEMYPSEA TREGLSEKLG 60 LTDRQLQMWF CHRRLKDKKE SAGMAAANAR TTSSVGRRDL MESPGNEMLA AESDSEHGSG 120 SGSGSGSGSR HYESSRTIME RRVIACVEAQ LGEPLREDGP ILGMEFDELP PGAFGSPIVP 180 AEQRDRYIQS CASKSYRQYD TKQIKAASSG LLETAEPKIR SAMHGHVGMS YLYDSPIDGP 240 TAKSLSLTHG NKYLPEEYSV EGQVSSVDRH GQFSSSPKPD NFIPYNDDNL HTERKRKSDE 300 AKSGRDVQAH EKKTRKELEK HDALRRKREE QIRKEMERQD RERRKEEQRM MREQQRQEEK 360 FQREERREME RREKFMQKEL LREERKKQKE ERRREKESAR QKAAAERATA RKIAKESMEL 420 IEDERLELME LAASMKGLPS IISLDYETMQ NLESFREGLC QFPPKTVKLK KPFAIQPWID 480 SEANVGNLLM VWRFCITFSD VLGLWPFTLD EFVQSFHDYD SRLLGEIHIA LLKLIIKDIE 540 DVVRTPSGGP GTNQYSAVNP EGGHPHIVEG AYLWGFDIRN WLKHLNPLTW PEILRQFALS 600 AGFGPRLKKK SLERRCMNDN DEVFRFFSPI CIISTHHIKG CVDIVSTLRN GSAAENAVAI 660 MQEKGIGLQR RSRHRLTPGT VKFAAYHVLA LEGSKGLNVI ELADKIQKSG LRDLSTSKTP 720 EASISVALSR DPILFERIAP STYCVRPAFR KDPADAESIL AAAREKIQRY ANGFLAGQNA 780 DEEERDDDSE SDVAEGPEGD GLATSFDANK INECNEVGSL SGNGKDDNPD AAALQNGIGI 840 GAGDPDQVGM EIDESRSGQL WVPGLTEGEY SNLSVEERLS TLVSLICIAN EGNSIRVILE 900 DRLDVANALK KQMLAEAQLD KRRMREEIVS KFYDSSFTPA ADGDQSPLVT AQNNMHDPSV 960 TTDNSAQDTS MVQFGFPIQQ NGYTTERSRL QLKSYIGHRA EEMYIYRSLP LGQDRRRNRY 1020 WQFVASASSQ DPGSGRIFVE SPDGHWRLID SKEAFDALFM SLDTRGTRES HLHIMLQKIE 1080 ISFKECIERN KQLSNILDQG VKSGNEAIEV CSANADKLEP SYSFKIDIGR NETEKRNSLS 1140 RYEDLQIWMW KECFSSHILR AIAHGKKRCS SGNFLEQVNC EEKLKSGINI VVSNSSPSPR 1200 IRLIKVLLSF LEVSVPSEAL KSSWTEDCRY SWGLKLQNSS SAEELLQILT QFEDALKCDF 1260 LSTDFETTSE LLSYCAASRD AACESTYSGS ITQLPWIPQT TAAVALRVLE LDASIFYVPQ 1320 QKSELHDGQT AEALPVEYLS VSCHAQFLAL *

Sequence ? help Back to Top

Protein Sequence Length: 1351 aa Download sequence

MDPDSEEEIN RNVNQSPPDG PKRPKRQMKT PFQLEVLEKT YAMEMYPSEA TREGLSEKLG  60
LTDRQLQMWF CHRRLKDKKE SAGMAAANAR TTSSVGRRDL MESPGNEMLA AESDSEHGSG  120
SGSGSGSGSR HYESSRTIME RRVIACVEAQ LGEPLREDGP ILGMEFDELP PGAFGSPIVP  180
AEQRDRYIQS CASKSYRQYD TKQIKAASSG LLETAEPKIR SAMHGHVGMS YLYDSPIDGP  240
TAKSLSLTHG NKYLPEEYSV EGQVSSVDRH GQFSSSPKPD NFIPYNDDNL HTERKRKSDE  300
AKSGRDVQAH EKKTRKELEK HDALRRKREE QIRKEMERQD RERRKEEQRM MREQQRQEEK  360
FQREERREME RREKFMQKEL LREERKKQKE ERRREKESAR QKAAAERATA RKIAKESMEL  420
IEDERLELME LAASMKGLPS IISLDYETMQ NLESFREGLC QFPPKTVKLK KPFAIQPWID  480
SEANVGNLLM VWRFCITFSD VLGLWPFTLD EFVQSFHDYD SRLLGEIHIA LLKLIIKDIE  540
DVVRTPSGGP GTNQYSAVNP EGGHPHIVEG AYLWGFDIRN WLKHLNPLTW PEILRQFALS  600
AGFGPRLKKK SLERRCMNDN DEVFRFFSPI CIISTHHIKG CVDIVSTLRN GSAAENAVAI  660
MQEKGIGLQR RSRHRLTPGT VKFAAYHVLA LEGSKGLNVI ELADKIQKSG LRDLSTSKTP  720
EASISVALSR DPILFERIAP STYCVRPAFR KDPADAESIL AAAREKIQRY ANGFLAGQNA  780
DEEERDDDSE SDVAEGPEGD GLATSFDANK INECNEVGSL SGNGKDDNPD AAALQNGIGI  840
GAGDPDQVGM EIDESRSGQL WVPGLTEGEY SNLSVEERLS TLVSLICIAN EGNSIRVILE  900
DRLDVANALK KQMLAEAQLD KRRMREEIVS KFYDSSFTPA ADGDQSPLVT AQNNMHDPSV  960
TTDNSAQDTS MVQFGFPIQQ NGYTTERSRL QLKSYIGHRA EEMYIYRSLP LGQDRRRNRY  1020
WQFVASASSQ DPGSGRIFVE SPDGHWRLID SKEAFDALFM SLDTRGTRES HLHIMLQKIE  1080
ISFKECIERN KQLSNILDQG VKSGNEAIEV CSANADKLEP SYSFKIDIGR NETEKRNSLS  1140
RYEDLQIWMW KECFSSHILR AIAHGKKRCS SGNFLEQVNC EEKLKSGINI VVSNSSPSPR  1200
IRLIKVLLSF LEVSVPSEAL KSSWTEDCRY SWGLKLQNSS SAEELLQILT QFEDALKCDF  1260
LSTDFETTSE LLSYCAASRD AACESTYSGS ITQLPWIPQT TAAVALRVLE LDASIFYVPQ  1320
QKSELHDGQT AEALPVEYLS VSCHAQFLAL *

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	73	80	RRLKDKKE

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G28420.1	0.0	HB-other family protein