PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Oeu056527.1

Organism

Olea europaea var. sylvestris

Taxonomic ID

158386

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea

Family

WOX

Protein Properties

Length: 365aa MW: 40310.1 Da PI: 8.6039

Description

WOX family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Oeu056527.1	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	57.5	2.3e-18	59	119	2	57
T--SS--HHHHHHHHHHHHH.SSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS Homeobox 2 rkRttftkeqleeLeelFek.nrypsaeereeLAkkl....gLterqVkvWFqNrRakekk 57 ++R+++ +eq+++Le+ F++ +ps++e++++ +l ++ +++V++WFqNr+ + k+ Oeu056527.1 59 KPRWNPRPEQIQILEAIFNSgMVNPSRDEIKKIRGQLqeygQVGDANVFYWFQNRKSRSKQ 119 89***************99***********************************996 PP
2	Wus_type_Homeobox	111.8	3.7e-36	58	121	2	65
Wus_type_Homeobox 2 artRWtPtpeQikiLeelyksGlrtPnkeeiqritaeLeeyGkiedkNVfyWFQNrkaRerqkq 65 +++RW+P+peQi+iLe++++sG+++P+++ei++i+ +L+eyG+++d+NVfyWFQNrk+R++qkq Oeu056527.1 58 PKPRWNPRPEQIQILEAIFNSGMVNPSRDEIKKIRGQLQEYGQVGDANVFYWFQNRKSRSKQKQ 121 689***********************************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 365 aa Download sequence
MGSSNKNWQS TFKSNSCTTT THHLWLHGIN SSIMSTGCQK PTYTSVTGAG GEERTLEPKP 60 RWNPRPEQIQ ILEAIFNSGM VNPSRDEIKK IRGQLQEYGQ VGDANVFYWF QNRKSRSKQK 120 QRQLQNTNTK SQSLWPITTI SSTLVKDRFS SSSSSSSDKT SPNSTERAFS VGSTSALNAS 180 TSPTSSVNQH FFQAPSDLIA DPFFFPVQQG HTAALPQGFC FPNVSDQSNH LLGDFMWMNK 240 GALKKAEYEK IKLQEQLSHV VATSQTFAHT IVPPSFTFPS PINPIQGIGN SVQVPKKSTV 300 FIDDACFEVV VGPFNVRDTF GEGAMLVHSS GLPIVTDEWG MTLHPLQDGG FYYLVRSFTS 360 SPYE*

Sequence ? help Back to Top

Protein Sequence Length: 365 aa Download sequence

MGSSNKNWQS TFKSNSCTTT THHLWLHGIN SSIMSTGCQK PTYTSVTGAG GEERTLEPKP  60
RWNPRPEQIQ ILEAIFNSGM VNPSRDEIKK IRGQLQEYGQ VGDANVFYWF QNRKSRSKQK  120
QRQLQNTNTK SQSLWPITTI SSTLVKDRFS SSSSSSSDKT SPNSTERAFS VGSTSALNAS  180
TSPTSSVNQH FFQAPSDLIA DPFFFPVQQG HTAALPQGFC FPNVSDQSNH LLGDFMWMNK  240
GALKKAEYEK IKLQEQLSHV VATSQTFAHT IVPPSFTFPS PINPIQGIGN SVQVPKKSTV  300
FIDDACFEVV VGPFNVRDTF GEGAMLVHSS GLPIVTDEWG MTLHPLQDGG FYYLVRSFTS  360
SPYE*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G45980.1	2e-51	WOX family protein