PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Oeu056692.1
Organism
Olea europaea var. sylvestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea
Family Trihelix
Protein Properties Length: 117aa    MW: 13539.7 Da    PI: 10.4203
Description Trihelix family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Oeu056692.1genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1trihelix44.54.1e-142503786
     trihelix 37 kmrergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqle 86
                 kmrergf rsp++C++kw+nl k+++k k+++ ++  + s +++y++++e
  Oeu056692.1  2 KMRERGFDRSPTMCTDKWRNLLKEFRKAKQNQDSN-GNGSAKMSYYKDIE 50
                 79*******************************97.666779*****998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 117 aa     Download sequence    
MKMRERGFDR SPTMCTDKWR NLLKEFRKAK QNQDSNGNGS AKMSYYKDIE EILRDRSKIE  60
ANYKSPTPPN AAAGVSKVES FLQFAEKGFP FLFRLFRDFA ISYSVLILVL LVLFRQ*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G13450.32e-34Trihelix family protein