PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Oeu057060.1

Organism

Olea europaea var. sylvestris

Taxonomic ID

158386

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea

Family

LBD

Protein Properties

Length: 160aa MW: 17445.6 Da PI: 6.4969

Description

LBD family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Oeu057060.1	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF260	137.9	3.4e-43	10	108	1	99
DUF260 1 aCaaCkvlrrkCakdCvlapyfpaeqpkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkaelallk 98 +CaaCk+lrrkC ++C +apyfp e+p kfanvhk+FGasnv+kll+++p+++reda++sl+yeAear++dPvyG+vg i+ lq+q+ +l++el++++ Oeu057060.1 10 PCAACKFLRRKCLPSCSFAPYFPPEEPTKFANVHKIFGASNVSKLLNEIPPHQREDAVNSLAYEAEARLKDPVYGCVGAISVLQRQVLHLQKELDATN 107 7*********************************************************************************************9987 PP DUF260 99 e 99 + Oeu057060.1 108 A 108 6 PP

Sequence ? help Back to Top
Protein Sequence Length: 160 aa Download sequence
MASSSYSNPP CAACKFLRRK CLPSCSFAPY FPPEEPTKFA NVHKIFGASN VSKLLNEIPP 60 HQREDAVNSL AYEAEARLKD PVYGCVGAIS VLQRQVLHLQ KELDATNADL MLYANNDAAH 120 SYQVTSNSTL YNGEESNPGL ILPYASPWNN SSSNDSKSM*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G27650.1	1e-69	LBD family protein