PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Oeu057145.1
Organism
Olea europaea var. sylvestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea
Family Trihelix
Protein Properties Length: 311aa    MW: 36499.7 Da    PI: 7.5827
Description Trihelix family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Oeu057145.1genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1trihelix77.12.7e-2455136186
     trihelix   1 rWtkqevlaLiearremeerlrrgklkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqle 86 
                  +W++qe+++ i++r ++e ++ ++k++k+lWe v ++mre+g++r+p qCk+kw+nl +ryk  ++   +    ss++cp+fd+l+
  Oeu057145.1  55 QWSNQETRDFIKIRGQLEGQFTSTKRNKNLWEMVVSRMREKGYRRTPDQCKCKWKNLVNRYKGQETYVVG----SSQQCPFFDELH 136
                  7**************************************************************9999997....5889******98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 311 aa     Download sequence    
MSLSPPTAQE TLHHQHHTFT SSPSPSLPPF SASASGVPGG RDDDEFPRRD ERCLQWSNQE  60
TRDFIKIRGQ LEGQFTSTKR NKNLWEMVVS RMREKGYRRT PDQCKCKWKN LVNRYKGQET  120
YVVGSSQQCP FFDELHAVLS ASANDMHQTQ FDYEVAMMRG KKRLKKVNRY QSAEEEDDES  180
DADEVVKAPK RRVGTEKRQR AGASEKLSEK SSKNTNNTDS ILSHLNEMLK SFFQQQQIID  240
MQWRESMEKR AQERDLFEQE WRQTMEKLER DRLTMEQAWR EADEKRWTRE ESLAEKRDDL  300
LKTLVNELVP *
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G38250.12e-33Trihelix family protein