PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Oeu057227.2

Organism

Olea europaea var. sylvestris

Taxonomic ID

158386

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea

Family

bHLH

Protein Properties

Length: 629aa MW: 69953 Da PI: 6.4176

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Oeu057227.2	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	13.5	0.00013	254	271	2	19
HHHHHHHHHHHHHHHHHH CS HLH 2 rrahnerErrRRdriNsa 19 r +h++ E+rRR++iN++ Oeu057227.2 254 RSKHSATEQRRRSKINDR 271 889*************96 PP
2	HLH	22.4	2.2e-07	350	381	20	55
HHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 20 feeLrellPkaskapskKlsKaeiLekAveYIksLq 55 f++Lre++P++ ++K +Ka+ L +++e+I+ Lq Oeu057227.2 350 FQRLREIIPNS----DQKRDKASFLLEVIEHIQFLQ 381 9*******9....9*****************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 629 aa Download sequence
MELPQPRPLG TEDRKATHDF LSLYSPVQQD PRPPQDGYLK THDFLQPLER VGKNSTKEES 60 KIEITAPGPP TSVEHVLPGG IGTYSISYLN QRILKPEGSI FMAQESSTTR SDENQNSASY 120 TGSGFTLWDE SAVKMGQTGK ENIATQRHIL RESGMNGVGG QWMTVFEPPS QSSSNWNHNS 180 KTFSSFLSSQ PSSSQKKQSF MNMMTSATND QEEDDDDDDD EEFVVKKEST PHPKGNLTVK 240 AEGKPVDQKP NTPRSKHSAT EQRRRSKIND RDFHLTMHGI EIEDCLIAGP EKLTSLIVEH 300 WQKYCPPKNV GLLGCRYFFL LWGYTLSIVH GKCSEDTKCI LDVDACVRVF QRLREIIPNS 360 DQKRDKASFL LEVIEHIQFL QEKVHKYESS YNVWNHEPSK FMQWSKSNIA EGFIDHSQGM 420 NSGSNSASVL PAKFDENKTS VSPTVPINGQ NLVELETKTA TTSREREPAL RTKTGPVPPT 480 MQHNIFSFGR TSIAASPVSP TPAYDADKTA SLPQSQFWQN RSCVNECTVA DVRMKNQELT 540 IESGTISISS VYSQRLLNTL TQALNNSGVD LSQANISVQI DLGKRASLSS ASTLKDDDEI 600 PTGNKALPRS RAATTEESEQ ALKRLKTS*

Sequence ? help Back to Top

Protein Sequence Length: 629 aa Download sequence

MELPQPRPLG TEDRKATHDF LSLYSPVQQD PRPPQDGYLK THDFLQPLER VGKNSTKEES  60
KIEITAPGPP TSVEHVLPGG IGTYSISYLN QRILKPEGSI FMAQESSTTR SDENQNSASY  120
TGSGFTLWDE SAVKMGQTGK ENIATQRHIL RESGMNGVGG QWMTVFEPPS QSSSNWNHNS  180
KTFSSFLSSQ PSSSQKKQSF MNMMTSATND QEEDDDDDDD EEFVVKKEST PHPKGNLTVK  240
AEGKPVDQKP NTPRSKHSAT EQRRRSKIND RDFHLTMHGI EIEDCLIAGP EKLTSLIVEH  300
WQKYCPPKNV GLLGCRYFFL LWGYTLSIVH GKCSEDTKCI LDVDACVRVF QRLREIIPNS  360
DQKRDKASFL LEVIEHIQFL QEKVHKYESS YNVWNHEPSK FMQWSKSNIA EGFIDHSQGM  420
NSGSNSASVL PAKFDENKTS VSPTVPINGQ NLVELETKTA TTSREREPAL RTKTGPVPPT  480
MQHNIFSFGR TSIAASPVSP TPAYDADKTA SLPQSQFWQN RSCVNECTVA DVRMKNQELT  540
IESGTISISS VYSQRLLNTL TQALNNSGVD LSQANISVQI DLGKRASLSS ASTLKDDDEI  600
PTGNKALPRS RAATTEESEQ ALKRLKTS*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G69010.1	3e-46	bHLH family protein