PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Oeu057265.1
Organism
Olea europaea var. sylvestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea
Family bHLH
Protein Properties Length: 287aa    MW: 31029.5 Da    PI: 5.7066
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Oeu057265.1genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH50.53.7e-16107152555
                  HHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
          HLH   5 hnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                  hn  E+rRR++iN+++  L+ l+P++      K +Ka++L +A+eY+k+Lq
  Oeu057265.1 107 HNLSEKRRRSQINEKLKALQNLVPNS-----SKTDKASMLDEAIEYLKQLQ 152
                  9************************8.....7******************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 287 aa     Download sequence    
MADLYGTNES EDMSSFLQFL LQNSSSAVTT SSPADGLFCG IGASAPVAEC SSAINFADPS  60
NFFAKVFDWI GSSAKLGNVG SSFEGAEASD IRVKPRSSKR SRAAEIHNLS EKRRRSQINE  120
KLKALQNLVP NSSKTDKASM LDEAIEYLKQ LQLQVQMLTL RNGLISHPGY SPGSLVPQSV  180
VAFDEGNILP NTSRQAETLS QEQEMFRQTA FDTSHHASST QQIVIDSMIT NSNSQIPAGF  240
TLPARNNYGL RNNLASFKDI CWDGTLSRFQ LDTSFLGNNP SPGVSS*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G36930.12e-34bHLH family protein