PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Oeu057343.1

Organism

Olea europaea var. sylvestris

Taxonomic ID

158386

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea

Family

MYB

Protein Properties

Length: 292aa MW: 32306.1 Da PI: 6.3949

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Oeu057343.1	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	52.3	1.3e-16	14	62	1	48
TSSS-HHHHHHHHHHHHHTTTT.-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg.tWktIartmgkgRtlkqcksrwqkyl 48 rg+W++eEd l+++v+++G+g +W + +++ g++R++k+c++rw++yl Oeu057343.1 14 RGAWSPEEDTTLKNYVQKYGTGgNWIALPHKAGLKRCGKSCRLRWLNYL 62 89*********************************************97 PP
2	Myb_DNA-binding	45.6	1.6e-14	69	111	2	46
SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 g +T+eEd +++++ + G++ W+ Ia++++ gRt++++k++w++ Oeu057343.1 69 GGFTEEEDNIILNLYNNIGSK-WSIIASHLP-GRTDNDVKNYWNT 111 569****************.*****.*********97 PP

Sequence ? help Back to Top
Protein Sequence Length: 292 aa Download sequence
MGRAPCCDKT KVKRGAWSPE EDTTLKNYVQ KYGTGGNWIA LPHKAGLKRC GKSCRLRWLN 60 YLRPDIKHGG FTEEEDNIIL NLYNNIGSKW SIIASHLPGR TDNDVKNYWN TKLKKKLLAE 120 VTTSLTAITA ATSVATTSIT NTSFCHVPSS ALTTKIETNH FYNSVNNTTL PYYPMEVNPH 180 HNFMPEMLGI STQIPLPRLV EVPENGINSY SGFPTIPLSK ELSNFSPSFS LDNSGISASW 240 SVNGGGEDNN TFLDEFDYGL SYDLLNIGFD FEDKTSEFNP SFTNSSDSFA G*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G57620.1	1e-71	MYB family protein