PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Oeu057371.1
Organism
Olea europaea var. sylvestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea
Family LBD
Protein Properties Length: 89aa    MW: 9870.49 Da    PI: 8.5063
Description LBD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Oeu057371.1genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF26065.81e-20486382
       DUF260  3 aaCkvlrrkCakdCvlapyf.....paeqpkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilk 82
                 ++C+vlrr+C+++C+l+p++     p++q++++ +v k+FG+s ++ ++ a+pe++r  +++ l++e + r+ +Pv+Ga+g++++
  Oeu057371.1  4 NSCRVLRRGCSEQCILRPCLdwiqtPQAQANATLFVSKFFGRSDLMDFIFAVPESKR--LFQPLMFETCGRTLNPVNGAMGLLST 86
                 78*************************************************999987..89********************9876 PP
Sequence ? help Back to Top
Protein Sequence    Length: 89 aa     Download sequence    
MSYNSCRVLR RGCSEQCILR PCLDWIQTPQ AQANATLFVS KFFGRSDLMD FIFAVPESKR  60
LFQPLMFETC GRTLNPVNGA MGLLSTGS*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G49940.13e-41LBD family protein