PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Oeu057530.1

Organism

Olea europaea var. sylvestris

Taxonomic ID

158386

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea

Family

LBD

Protein Properties

Length: 135aa MW: 15108.2 Da PI: 9.0009

Description

LBD family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Oeu057530.1	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF260	147.3	4.1e-46	9	108	1	100
DUF260 1 aCaaCkvlrrkCakdCvlapyfpaeqpkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkaelallk 98 +CaaCk lrrkC+++Cv+apyfp +qp+kfanvhk+FGasnv+kllk+l++++reda++sl+yeAe+r+rdPvyG+vgvi+ lq+ql+ql+++l ++k Oeu057530.1 9 PCAACKSLRRKCQPECVFAPYFPPDQPQKFANVHKVFGASNVTKLLKELQPHQREDAVNSLAYEAEMRLRDPVYGCVGVISVLQHQLRQLQTDLRYAK 106 7**********************************************************************************************999 PP DUF260 99 ee 100 +e Oeu057530.1 107 SE 108 87 PP

Sequence ? help Back to Top
Protein Sequence Length: 135 aa Download sequence
MASSSSNSPC AACKSLRRKC QPECVFAPYF PPDQPQKFAN VHKVFGASNV TKLLKELQPH 60 QREDAVNSLA YEAEMRLRDP VYGCVGVISV LQHQLRQLQT DLRYAKSELS KYKNLGHDGL 120 IEASTHHHHH PRST*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G65620.3	7e-57	LBD family protein