PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Oeu057849.2

Organism

Olea europaea var. sylvestris

Taxonomic ID

158386

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea

Family

bHLH

Protein Properties

Length: 483aa MW: 53198.7 Da PI: 5.3571

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Oeu057849.2	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	28.3	3.1e-09	294	341	4	55
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 +h+ +Er RR++i +++ L++l+P + +k Ka +L + ++Y++sLq Oeu057849.2 294 SHSLAERVRREKISERMKLLQDLVPGC----NKVTGKALMLDEIINYVQSLQ 341 8***********************9....677***************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 483 aa Download sequence
MDRVISENWN SPPQFETTWN GMNCNAEESF LDPNWDKTCT DQFTHFEPVL SSNSSFSNDF 60 PLRELIGKLG IGNSSGFPPT VTTAAPSMAA ATNDNNTNNS CFSTPSNSPP KLHFPIPDQI 120 NTRHMGNSLP PTPPLPSLPG DPGFAERAAK FSCYGSQSFN GRTSPFESNN AMGSANSNEE 180 SSVSEQIPSG EIGLKPPNEL NSRKRKAVSK GKPKEDSSTS AKGFEDDNYA KTKRSKPQAI 240 SKNENDDVKT EEEAKGNSNG SEDENEKQKA NPKSPEPPKD YIHVRARRGQ ATDSHSLAER 300 VRREKISERM KLLQDLVPGC NKVTGKALML DEIINYVQSL QRQVEFLSMK LASVNPRLDF 360 EMENLLSKDM FQENGNLSQP LYPLDSSAPA FYHHQPKQNV QLHDANFSRG PLNQCSMDPL 420 DAHNVGIQLS SVDGFGERLS QFPAFDGHDL QSIVQMGFGQ DPVKENAFHS VTNQTSQTKV 480 EL*

Sequence ? help Back to Top

Protein Sequence Length: 483 aa Download sequence

MDRVISENWN SPPQFETTWN GMNCNAEESF LDPNWDKTCT DQFTHFEPVL SSNSSFSNDF  60
PLRELIGKLG IGNSSGFPPT VTTAAPSMAA ATNDNNTNNS CFSTPSNSPP KLHFPIPDQI  120
NTRHMGNSLP PTPPLPSLPG DPGFAERAAK FSCYGSQSFN GRTSPFESNN AMGSANSNEE  180
SSVSEQIPSG EIGLKPPNEL NSRKRKAVSK GKPKEDSSTS AKGFEDDNYA KTKRSKPQAI  240
SKNENDDVKT EEEAKGNSNG SEDENEKQKA NPKSPEPPKD YIHVRARRGQ ATDSHSLAER  300
VRREKISERM KLLQDLVPGC NKVTGKALML DEIINYVQSL QRQVEFLSMK LASVNPRLDF  360
EMENLLSKDM FQENGNLSQP LYPLDSSAPA FYHHQPKQNV QLHDANFSRG PLNQCSMDPL  420
DAHNVGIQLS SVDGFGERLS QFPAFDGHDL QSIVQMGFGQ DPVKENAFHS VTNQTSQTKV  480
EL*

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	203	233	RKRKAVSKGKPKEDSSTSAKGFEDDNYAKTK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G07340.1	2e-86	bHLH family protein