PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Oeu058191.1
Organism
Olea europaea var. sylvestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea
Family YABBY
Protein Properties Length: 121aa    MW: 13297.2 Da    PI: 6.3238
Description YABBY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Oeu058191.1genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1YABBY85.61.4e-2671106122
        YABBY   6 sseqvCyvqCnfCntilavsvPstslfkvvtvrCGhCtsllsvnlakasqllaaeshldeslkeelleelkveeenlksnvekeesastsvsseklse 103
                   se+vCyv+CnfCntilavsvP +s+ ++vtvrCGhC++llsvn+    q +  ++             ++++++++ +   ++e+ s+s+ s+  + 
  Oeu058191.1   7 GSERVCYVHCNFCNTILAVSVPCNSMPTIVTVRCGHCSNLLSVNVGALLQSVHIQDF------------QHQKQQSTAELAATTECGSSSRCSKLTPF 92 
                  689******************************************998887766663............33344455555556666666666666677 PP

        YABBY 104 nedeevprvppvirPPekr 122
                  + + e pr+ p irPPek 
  Oeu058191.1  93 EPEYEQPRMTP-IRPPEKD 110
                  88899999999.99**995 PP
Sequence ? help Back to Top
Protein Sequence    Length: 121 aa     Download sequence    
MSLDMTGSER VCYVHCNFCN TILAVSVPCN SMPTIVTVRC GHCSNLLSVN VGALLQSVHI  60
QDFQHQKQQS TAELAATTEC GSSSRCSKLT PFEPEYEQPR MTPIRPPEKD NAFLQHIIDL  120
*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G08465.12e-33YABBY family protein