PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Oeu058200.1
Organism
Olea europaea var. sylvestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea
Family FAR1
Protein Properties Length: 254aa    MW: 29774.6 Da    PI: 6.3176
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Oeu058200.1genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR174.62.1e-2380168390
         FAR1   3 YneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerr.traetrtgCkaklkvkkekdgkwevtkleleHnHela 90 
                  Y +Y++ +GF+vr++++++s+ n+ ++ ++fvCs+eg+re++  +++++     ++tr gC a+l+v +++  kw+vtk++++HnH+l+
  Oeu058200.1  80 YITYGRYTGFTVRIHHNRRSRINNMVIGQDFVCSREGYREKKYVHRKDRVLpIPPTTREGCPAMLRVALRDGVKWVVTKFVKDHNHTLM 168
                  99***************************************998833333335789*******************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 254 aa     Download sequence    
MESASSQAFD LDERKIFLPI ESNNDNGFLD DELICSMNLC MEEDDKCAGE TNVDLSLTEK  60
TIEPYIGMDF NSRDEARESY ITYGRYTGFT VRIHHNRRSR INNMVIGQDF VCSREGYREK  120
KYVHRKDRVL PIPPTTREGC PAMLRVALRD GVKWVVTKFV KDHNHTLMSP NKVPLRGGKN  180
LISQDDKDQK IRELTLELYN ERQRCKRRCT AYQEQIQTLL KHIEEHTDHL SRSVQDIVQR  240
VKELENEELE NWY*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1202207RQRCKR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G07500.13e-34FAR1 family protein