PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Oeu058417.2

Organism

Olea europaea var. sylvestris

Taxonomic ID

158386

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea

Family

bHLH

Protein Properties

Length: 350aa MW: 39029 Da PI: 6.6332

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Oeu058417.2	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	37.7	3.6e-12	102	160	3	54
HHHHHHHHHHHHHHHHHHHHHHCTSCCC..........TTS-STCHHHHHHHHHHHHHH CS HLH 3 rahnerErrRRdriNsafeeLrellPkas.......kapskKlsKaeiLekAveYIksL 54 ++h+e+ErrRR+riN+ +++Lr+llP+ + + +k+ +Ka+ L ++++ +k+L Oeu058417.2 102 KNHSEAERRRRERINNHLAKLRSLLPSTTkcvsskeRIMAKRTDKASLLAEVIQQVKEL 160 78***********************77799999999*******99988887 PP

Sequence ? help Back to Top
Protein Sequence Length: 350 aa Download sequence
MQQQNSTFQE VPQILPWSFS PGQNFNPVHH FSTHNHDPFL LPPAPSSYGG LFNRRPSGLQ 60 FEYEGGLGQL VHESSVPFGL QAELQKMTAQ EIMDAKALAA SKNHSEAERR RRERINNHLA 120 KLRSLLPSTT KCVSSKERIM AKRTDKASLL AEVIQQVKEL KRQTSLIEES SPVPTEIDEL 180 TVDNESYADG RFILKASLCC EDRSDLLPDI IKTLKDLRLK TLKAEITTLG GRVKNVLLIT 240 GEEDSNSDDQ EQREYTITSI QEALKAVMER SNCGDSGPGS VKRLRTNINI LERRYNYVEI 300 EKVDMSGLWT SQKDDTQIKN STSLLAATSA TFPPTCNSFQ ASSSGVLNF*

Sequence ? help Back to Top

Protein Sequence Length: 350 aa Download sequence

MQQQNSTFQE VPQILPWSFS PGQNFNPVHH FSTHNHDPFL LPPAPSSYGG LFNRRPSGLQ  60
FEYEGGLGQL VHESSVPFGL QAELQKMTAQ EIMDAKALAA SKNHSEAERR RRERINNHLA  120
KLRSLLPSTT KCVSSKERIM AKRTDKASLL AEVIQQVKEL KRQTSLIEES SPVPTEIDEL  180
TVDNESYADG RFILKASLCC EDRSDLLPDI IKTLKDLRLK TLKAEITTLG GRVKNVLLIT  240
GEEDSNSDDQ EQREYTITSI QEALKAVMER SNCGDSGPGS VKRLRTNINI LERRYNYVEI  300
EKVDMSGLWT SQKDDTQIKN STSLLAATSA TFPPTCNSFQ ASSSGVLNF*

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	108	113	ERRRRE

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G68810.1	4e-78	bHLH family protein