PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Oeu058618.1
Organism
Olea europaea var. sylvestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea
Family MYB
Protein Properties Length: 292aa    MW: 32509.6 Da    PI: 7.4174
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Oeu058618.1genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding44.92.7e-141462148
                     TSSS-HHHHHHHHHHHHHTTTT.-HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGgg.tWktIartmgkgRtlkqcksrwqkyl 48
                     +g+WT++Ed++lv++++  G++ +W + ++  g+ R++k+c++rw +yl
      Oeu058618.1 14 KGPWTADEDKKLVEYITNNGSHgSWCSLPKLAGLLRCGKSCRLRWTNYL 62
                     79*******************************99************97 PP
2Myb_DNA-binding47.63.7e-1568113148
                      TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 
                      rg+++ eE++l ++++  lG++ W++Ia+ ++ gRt++++k+ w+++l
      Oeu058618.1  68 RGPFSSEEEKLVIELHGILGNR-WAAIASQLP-GRTDNEIKNLWNTHL 113
                      89********************.*********.************986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 292 aa     Download sequence    
MGRKPCCEKK GLKKGPWTAD EDKKLVEYIT NNGSHGSWCS LPKLAGLLRC GKSCRLRWTN  60
YLRPDIIRGP FSSEEEKLVI ELHGILGNRW AAIASQLPGR TDNEIKNLWN THLKKRVLKV  120
GIDPQTHTHP LTSNGLVERC PASPSTLHMI QWESVRLEAE ARLSRETLFG KSDSDYFLRL  180
WNSEVGEAFQ KFDKGNKTAC QYSVSTSSTK HGSISGTTTE MCLIRTGSSV DADCKNSEGY  240
ADDVVLPKSD SMNSNEIEDS SESVLQFLLD FPSNNDGYSV NPAFFNERSL N*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G61250.11e-108MYB family protein