PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Oeu058835.1

Organism

Olea europaea var. sylvestris

Taxonomic ID

158386

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea

Family

CO-like

Protein Properties

Length: 302aa MW: 33167.4 Da PI: 6.8674

Description

CO-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Oeu058835.1	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-B_box	27.6	6.1e-09	18	62	3	41
zf-B_box 3 erkCpeHeekelqlfCedCqqllCedClleeHkg......Htvvp 41 ++C+ +e+ +++ C+ + lC +C +H+ H++ p Oeu058835.1 18 VWMCEACEQAPATVTCKADAASLCVTCDRDIHSAnplsrrHERAP 62 689*****************************6578888888766 PP
2	CCT	70.6	3.8e-24	239	282	1	44
CCT 1 ReaallRYkeKrktRkFeKkirYesRKavAesRpRvKGrFvkqa 44 Rea++lRYkeKrk+RkFeK+irY+sRKa+Ae+RpR+KGrF+k++ Oeu058835.1 239 REARVLRYKEKRKNRKFEKTIRYASRKAYAETRPRIKGRFAKRT 282 9*****************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 302 aa Download sequence
MCMACDAKMH KNISHERVWM CEACEQAPAT VTCKADAASL CVTCDRDIHS ANPLSRRHER 60 APVVPFFDTA ESVLKSTATT GLLPMNESTR DVCISSNESW NISTNPDAIR LAAPDTVEDM 120 KPVEFSFTDA DQFLDFGYPI CLQADSVVPA PTIKIPPVPT QLTNFSSENG AEIGFTRSNI 180 NSYNSSFTSP SLSLSVSSSS LDVGVVPDGS CVSDTSYPFA RNMSSSVNPS GNQLSGLDRE 240 ARVLRYKEKR KNRKFEKTIR YASRKAYAET RPRIKGRFAK RTEVESEVDR MFSYGVVPSL 300 L*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G57660.1	1e-71	CO-like family protein