PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Oeu058849.1
Organism
Olea europaea var. sylvestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea
Family M-type_MADS
Protein Properties Length: 222aa    MW: 24783.3 Da    PI: 6.7917
Description M-type_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Oeu058849.1genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF61.41e-19959151
                 S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS
       SRF-TF  1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51
                 k+ien++  q+tf+k +  i KKA ELSvLCd++v +i+fs+ g+l  ++s
  Oeu058849.1  9 KPIENSISLQTTFAKHKDVIVKKARELSVLCDTDVGLILFSPAGHLTSFAS 59
                 78*********************************************9986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 222 aa     Download sequence    
MVRKKLAMKP IENSISLQTT FAKHKDVIVK KARELSVLCD TDVGLILFSP AGHLTSFASN  60
GSVEDIFLCF VDRPHDLKGG HTRNEENLSR RLKHLKYERQ ILEKVAKWYE PNVEKINSIL  120
EAEVYEQFLT TAMQHIQQSK AKLLDNEVGP LRSENIETNI EDAAFITDHS ADMDQNRCSV  180
GVEGHAGTCI PMGPHLSLSF IKSQKPWNAV GGELTPKLDG F*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G22130.11e-22MIKC_MADS family protein