PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Oeu058984.1
Organism
Olea europaea var. sylvestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea
Family bHLH
Protein Properties Length: 257aa    MW: 28632.4 Da    PI: 7.4544
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Oeu058984.1genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH35.41.9e-1162108354
                  HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
          HLH   3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 
                  r+h+e+ErrRR+riN  + +Lr+l+P        K++Ka+ L ++++ +k+L
  Oeu058984.1  62 RNHSEAERRRRERINGHLGTLRSLIPGT-----NKMDKAALLAEVINKVKEL 108
                  58*************************6.....5************999888 PP
Sequence ? help Back to Top
Protein Sequence    Length: 257 aa     Download sequence    
MDFFDTTNGY SGNYFGFQGI ITNGSSSSSS LILDKEREEL VRTMVKPGQK EVNAEKALIT  60
LRNHSEAERR RRERINGHLG TLRSLIPGTN KMDKAALLAE VINKVKELRG NVAEATKGTL  120
VPTDIDEVRV EQQTDEHDGA FFSIRASLCC DYRHEILSDL RLALESLPLK TVRSEIATLG  180
SRMVNVFVVT GCNTENFKNS PEDCQPLIDS VRLALKSVLD KFYASEEFTS RNMVSSKRRK  240
VSFLSPSNSS SLGDFW*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
16873ERRRRE
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G68810.11e-33bHLH family protein