PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Oeu058993.2

Organism

Olea europaea var. sylvestris

Taxonomic ID

158386

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea

Family

Trihelix

Protein Properties

Length: 373aa MW: 42060.2 Da PI: 9.9982

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Oeu058993.2	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	49.6	1e-15	76	166	1	86
trihelix 1 rWtkqevlaLiearremeerlrrgklkkplWeevskkm.....rergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqle 86 +W+++ +++Liea + +l+rg+l++++W+ev++++ + ++++r+ +qCk++ + ++k+yk +k+ + + + st+p+fd+l+ Oeu058993.2 76 CWSEEATRTLIEAWGSHFLELNRGNLRQKHWQEVADAVnalhaHTKKLHRTDVQCKNRVDTVKKKYKIEKTKVVQSNGRYASTWPHFDSLD 166 7**************************************99999********************999999899999*****98 PP

Sequence ? help Back to Top
Protein Sequence Length: 373 aa Download sequence
MSRSSTASPT LSTTTSPNHS PSLHLPTASM SDDENGGAPL SHPLPVTTKT ESLSETPKSE 60 GYTSTRTPTF PVREDCWSEE ATRTLIEAWG SHFLELNRGN LRQKHWQEVA DAVNALHAHT 120 KKLHRTDVQC KNRVDTVKKK YKIEKTKVVQ SNGRYASTWP HFDSLDSLIG DTFSKANSVP 180 SNGHKKNLRR RVSLSPEVST SPPPANKKMT HYRKRSPESI THLPKVPWSV PVGPRSKRPG 240 NGNLTERNFS VMAAAAAAVE AKEGEEEEDE EDEDETWLRQ LPVVERKKRR LVEEGDGSVG 300 DGYRRLAKAL SRLGDIYEKV ESAKQRQMVE LEKQRMQFVK DLEIQRMKLF MDSQVQVEKL 360 KRMKNHSRNS ES*

Sequence ? help Back to Top

Protein Sequence Length: 373 aa Download sequence

MSRSSTASPT LSTTTSPNHS PSLHLPTASM SDDENGGAPL SHPLPVTTKT ESLSETPKSE  60
GYTSTRTPTF PVREDCWSEE ATRTLIEAWG SHFLELNRGN LRQKHWQEVA DAVNALHAHT  120
KKLHRTDVQC KNRVDTVKKK YKIEKTKVVQ SNGRYASTWP HFDSLDSLIG DTFSKANSVP  180
SNGHKKNLRR RVSLSPEVST SPPPANKKMT HYRKRSPESI THLPKVPWSV PVGPRSKRPG  240
NGNLTERNFS VMAAAAAAVE AKEGEEEEDE EDEDETWLRQ LPVVERKKRR LVEEGDGSVG  300
DGYRRLAKAL SRLGDIYEKV ESAKQRQMVE LEKQRMQFVK DLEIQRMKLF MDSQVQVEKL  360
KRMKNHSRNS ES*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G58630.1	6e-31	Trihelix family protein