PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Oeu059035.1
Organism
Olea europaea var. sylvestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea
Family GRAS
Protein Properties Length: 547aa    MW: 61008.6 Da    PI: 6.9503
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Oeu059035.1genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS450.31.2e-1371765461374
         GRAS   1 lvelLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfshlta 98 
                  l+++L++cA+avs++dl +aq+l+++l++l+s +g+p+qRl ay++e+L arla+s+s++yk+l+++e +   s e l+++++++e++P++kf+++ a
  Oeu059035.1 176 LKKVLIACAKAVSNNDLLMAQWLISELRQLVSVSGEPIQRLGAYMLEGLVARLASSGSSIYKSLRCKEPA---SFELLSYMQILYEACPYFKFGYMSA 270
                  5789*****************************************************************9...9************************ PP

         GRAS  99 NqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesg..skeeleetgerLakfAeelgvpfefnvlvakrledleleeL 194
                  N aI ea++ e++vHiiDf+i+qG QW++L+qa+a+Rp+gpp++RiTg+++++s   +    + +g++L+k+A++++vpfef++ +  +  d +le+L
  Oeu059035.1 271 NGAIAEAMKDESKVHIIDFQIGQGSQWISLIQAFAARPGGPPQIRITGIDDSSSAyaRGGGPNIVGRKLSKLAKTFKVPFEFHF-ANMSGCDAQLENL 367
                  ***************************************************98888888999**********************.78899999***** PP

         GRAS 195 rvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpreseerikvErellgr 292
                   ++pgEalaVn++++lh+++desvs+e++rd +L+lvksl+Pkvv++veqe+++n++ F+ rfleal+yy+a+f+s++a+lpre +eri+vE+++l+r
  Oeu059035.1 368 GIQPGEALAVNFAFMLHHMPDESVSTENHRDMLLRLVKSLNPKVVTLVEQESNTNTAAFFPRFLEALDYYTAMFESIDATLPRERKERINVEQHCLAR 465
                  ************************************************************************************************** PP

         GRAS 293 eivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrpLvsvSaWr 374
                  ++vn++aceg er+erhe l+kW++r+++aGF+p+pls+ +++++k+ll+++  + yr+ e++g+l+lgW +r Lv+ +aW+
  Oeu059035.1 466 DVVNIIACEGMERVERHELLGKWKSRFKMAGFSPYPLSSLVNATIKTLLKNYCTK-YRLVERDGALYLGWLNRDLVASCAWK 546
                  *****************************************************77.*************************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 547 aa     Download sequence    
MQASRSQNRS RMSNTLQYQP VQKLGACFPP FQHFGEDLSY NNRSNVGNSC SIQISNDQYC  60
TLESSPMSVN YTVYNSPSNV IFSPGRSPVS QKDSQSCPTE PCLSPDTNYG SSISESCITE  120
DANDFRHKLK ELETVMLGPD LDILAIYNNS LPSNIISTPD IDNWRQMMEA IPRGDLKKVL  180
IACAKAVSNN DLLMAQWLIS ELRQLVSVSG EPIQRLGAYM LEGLVARLAS SGSSIYKSLR  240
CKEPASFELL SYMQILYEAC PYFKFGYMSA NGAIAEAMKD ESKVHIIDFQ IGQGSQWISL  300
IQAFAARPGG PPQIRITGID DSSSAYARGG GPNIVGRKLS KLAKTFKVPF EFHFANMSGC  360
DAQLENLGIQ PGEALAVNFA FMLHHMPDES VSTENHRDML LRLVKSLNPK VVTLVEQESN  420
TNTAAFFPRF LEALDYYTAM FESIDATLPR ERKERINVEQ HCLARDVVNI IACEGMERVE  480
RHELLGKWKS RFKMAGFSPY PLSSLVNATI KTLLKNYCTK YRLVERDGAL YLGWLNRDLV  540
ASCAWK*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G48150.10.0GRAS family protein