PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Oeu059218.1

Organism

Olea europaea var. sylvestris

Taxonomic ID

158386

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea

Family

MIKC_MADS

Protein Properties

Length: 246aa MW: 28018 Da PI: 9.1234

Description

MIKC_MADS family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Oeu059218.1	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	SRF-TF	101.6	3e-32	9	59	1	51
S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS SRF-TF 1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51 krienk+nrqvtfskRrng+lKKA+ELSvLCdaeva+iifss+gklye++s Oeu059218.1 9 KRIENKINRQVTFSKRRNGLLKKAYELSVLCDAEVALIIFSSRGKLYEFAS 59 79***********************************************86 PP
2	K-box	99.4	5.2e-33	81	167	10	96
K-box 10 eeakaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrk 96 +e++++s++qe++kLk+++e Lqr+qR+llGedL++L++keL++Le+qLe +l++ R++K+++++eq+e+l++ke++l e nk+L+ Oeu059218.1 81 AERETQSWYQEVSKLKAKYEALQRTQRNLLGEDLGPLNVKELENLEKQLEGALTQARQRKTKIMMEQMEDLRRKERQLGEMNKQLKI 167 57899*******************************************************************************985 PP

Sequence ? help Back to Top
Protein Sequence Length: 246 aa Download sequence
MGRGRVELKR IENKINRQVT FSKRRNGLLK KAYELSVLCD AEVALIIFSS RGKLYEFASA 60 GMTATLERYQ RCCFNPLNTG AERETQSWYQ EVSKLKAKYE ALQRTQRNLL GEDLGPLNVK 120 ELENLEKQLE GALTQARQRK TKIMMEQMED LRRKERQLGE MNKQLKIRVS LELSSHETEG 180 QGLRGFPCQW NAAASAGTST FMVQPGSNPM EFEPEPVLQM GYHHYNLGEG SSVPRNMAVD 240 SFDLF*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G45650.1	1e-100	MIKC_MADS family protein