PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Oeu059276.1

Organism

Olea europaea var. sylvestris

Taxonomic ID

158386

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea

Family

TCP

Protein Properties

Length: 397aa MW: 43604.9 Da PI: 6.8498

Description

TCP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Oeu059276.1	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCP	105.4	8.9e-33	36	170	2	118
TCP 2 agkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgt...........................ssssase 72 +g+kdrhsk++T++g+RdRRvRl a++a++f+d+qd+LG+d++sk+ +WL+++ak ai+el ++ Oeu059276.1 36 TGRKDRHSKVSTSKGPRDRRVRLAAHTAIQFYDVQDRLGYDRPSKAMDWLIKKAKSAIDELEQLparnptnfsaenaifeqeqacvvdpntA------ 127 79**************************************************************7666653333333222222222221110...... PP TCP 73 ceaesssssasnsssg............kaaksaakskksqksaasalnlakesraka 118 g ++ + +++++++++as+l ++ +s++ a Oeu059276.1 128 ---------------GssskramtmlenENGLQVLHQSSNEDPNASFLPPSLDSNSTA 170 ...............1222333444432112222233333333333343333333333 PP

Sequence ? help Back to Top
Protein Sequence Length: 397 aa Download sequence
MEENTRSQQI PSRVGLRNCT GSDIGEVQGC HIVRSTGRKD RHSKVSTSKG PRDRRVRLAA 60 HTAIQFYDVQ DRLGYDRPSK AMDWLIKKAK SAIDELEQLP ARNPTNFSAE NAIFEQEQAC 120 VVDPNTAGSS SKRAMTMLEN ENGLQVLHQS SNEDPNASFL PPSLDSNSTA DAMKSRFPIG 180 SPRTRSQSQD LWLSLQSFQD PLMPHQHQHP QPPHHKNHTH NTEEAYSQHQ VPLNGTTLLG 240 FDGDYAGLSE HHQHQPTEIS RFQGLAPWDT GGDISGGNGG AAGYLFTSQP APQPGLQHLL 300 GQSQFFSHGG PLQSSSKPSI RPWMDPLTIL NTTSDHSHQH HHRNPAAVPI YLSSISGVDF 360 TSTVGGFSGF HIPARIQGDK EEHDGYTDKP SSDSHH*

Sequence ? help Back to Top

Protein Sequence Length: 397 aa Download sequence

MEENTRSQQI PSRVGLRNCT GSDIGEVQGC HIVRSTGRKD RHSKVSTSKG PRDRRVRLAA  60
HTAIQFYDVQ DRLGYDRPSK AMDWLIKKAK SAIDELEQLP ARNPTNFSAE NAIFEQEQAC  120
VVDPNTAGSS SKRAMTMLEN ENGLQVLHQS SNEDPNASFL PPSLDSNSTA DAMKSRFPIG  180
SPRTRSQSQD LWLSLQSFQD PLMPHQHQHP QPPHHKNHTH NTEEAYSQHQ VPLNGTTLLG  240
FDGDYAGLSE HHQHQPTEIS RFQGLAPWDT GGDISGGNGG AAGYLFTSQP APQPGLQHLL  300
GQSQFFSHGG PLQSSSKPSI RPWMDPLTIL NTTSDHSHQH HHRNPAAVPI YLSSISGVDF  360
TSTVGGFSGF HIPARIQGDK EEHDGYTDKP SSDSHH*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G15030.2	2e-65	TCP family protein