PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Oeu059535.1
Organism
Olea europaea var. sylvestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea
Family HB-other
Protein Properties Length: 280aa    MW: 31882 Da    PI: 6.1777
Description HB-other family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Oeu059535.1genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox60.42.9e-192377256
                 T--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS
     Homeobox  2 rkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56
                 ++ ++++++q+++Le++F+++++p++++r++L++kl L+++q+k+WFqN+R++ k
  Oeu059535.1 23 KPCHRHSTQQIQQLEAFFKECPHPDENQRKQLSRKLALSTNQIKFWFQNKRTQTK 77
                 5557899********************************************9987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 280 aa     Download sequence    
MDSRYGGSES GDEQTSNSRR DKKPCHRHST QQIQQLEAFF KECPHPDENQ RKQLSRKLAL  60
STNQIKFWFQ NKRTQTKAQD DKADNSTLRS ENERMHCENL AMKEALNKII CPTCDGPRLD  120
EEGRQRNLQK LRMENALLKE EHEQVLNAYY SFMGQSPTSL QTPSLGIGSS VSDPGKQVFR  180
QGMGGPLLDP EQIPQSSQNN TSPFHLKEIQ EMEKSIIIET AAAAMDELEK LLQIKEPVWI  240
QSLTEDIYFI EIAMTSFFPR QIILKPLVPG LNHPEIPVS*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G03260.14e-56HD-ZIP family protein