PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Oeu059632.1
Organism
Olea europaea var. sylvestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea
Family GRAS
Protein Properties Length: 576aa    MW: 63433.8 Da    PI: 5.1037
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Oeu059632.1genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS4424.2e-1352055701374
         GRAS   1 lvelLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfshlta 98 
                  lv++L++cAeav+ ++++la+al++++  la ++  pm+++a+yf+eALa+r+++    +y    p ++ e++ s++l++   f+e +P+lkf+h+ta
  Oeu059632.1 205 LVHTLMACAEAVQRDNMKLADALVKHVGILAVSQVGPMRKVATYFAEALARRIYK----IY----PHDSLESSYSDVLQM--HFYESCPYLKFAHFTA 292
                  689***************************************************9....44....444444445566554..4*************** PP

         GRAS  99 NqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesg..skeeleetgerLakfAeelgvpfefnvlvakrledleleeL 194
                  NqaIlea++g++rvH+iDf+++qG+QWpaL+qaLa Rp+gpp++R+Tg+++p+++  ++  l+++g++La++Ae++gv+f+f+ +v+k+l dl+ + +
  Oeu059632.1 293 NQAILEAFAGANRVHVIDFSLKQGMQWPALMQALALRPGGPPEFRLTGIEPPQPDntDALLLQQVGWKLAQLAETVGVEFKFRGFVSKSLVDLDASVM 390
                  *****************************************************998888899************************************ PP

         GRAS 195 rvkp..gEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsl.eaklpreseerikvErel 289
                  ++kp   Ea+aVn+v++ hrll++++ +++    vL+ +k ++Pk+v++veqea+hn+  Fl+rf e+l+yys++fdsl +++  + ++e+ ++ +++
  Oeu059632.1 391 DIKPdnVEAVAVNSVFEFHRLLARPGGINK----VLNSIKAMNPKIVTIVEQEANHNGIVFLDRFNESLHYYSTMFDSLeSSGSNQPNSEDFVMTEVY 484
                  **99889********************999....*********************************************444555666********** PP

         GRAS 290 lgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvk.sdgyrveeesgslvlgWkdrpLvsvSaWr 374
                  lgr+i+nvvaceg +r+erhetl++Wr r+++aGF pvpl+++a kqa++ll+ ++ +dgyrvee++gsl+lgW++rpL+++SaW+
  Oeu059632.1 485 LGRQICNVVACEGPDRVERHETLSQWRGRMNSAGFDPVPLGSNAFKQASMLLALFAgGDGYRVEENDGSLMLGWHTRPLIATSAWQ 570
                  *************************************************************************************6 PP
Sequence ? help Back to Top
Protein Sequence    Length: 576 aa     Download sequence    
MERERDRGKA ETAAGGTAAG KMKSWEEWQP QADGGMDELF AVLGYKVKSS DMAAVANKLD  60
QLEMAMVTTM EDGISHLSTD TIHYNPSDLS GWVESLLTEL SSASNFDVLP QQIGVRGESS  120
SNLISFSNDK PIQKNRKVIY DYDLRAIPGG AICSSGNEEE NPNHEPDIGI KRHRFSPGTE  180
FLDNTSLAAA RPVVLVDSQE TGVRLVHTLM ACAEAVQRDN MKLADALVKH VGILAVSQVG  240
PMRKVATYFA EALARRIYKI YPHDSLESSY SDVLQMHFYE SCPYLKFAHF TANQAILEAF  300
AGANRVHVID FSLKQGMQWP ALMQALALRP GGPPEFRLTG IEPPQPDNTD ALLLQQVGWK  360
LAQLAETVGV EFKFRGFVSK SLVDLDASVM DIKPDNVEAV AVNSVFEFHR LLARPGGINK  420
VLNSIKAMNP KIVTIVEQEA NHNGIVFLDR FNESLHYYST MFDSLESSGS NQPNSEDFVM  480
TEVYLGRQIC NVVACEGPDR VERHETLSQW RGRMNSAGFD PVPLGSNAFK QASMLLALFA  540
GGDGYRVEEN DGSLMLGWHT RPLIATSAWQ LKPAE*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G14920.10.0GRAS family protein