PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Oeu059712.1
Organism
Olea europaea var. sylvestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea
Family LBD
Protein Properties Length: 157aa    MW: 17452 Da    PI: 7.3384
Description LBD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Oeu059712.1genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF260131.53.4e-4112110199
       DUF260   1 aCaaCkvlrrkCakdCvlapyfpaeqpkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkaelallk 98 
                  +CaaCk+l+r+C++ C +apyf +++p+kfa vhk+FGasnv+k+l+++pe++reda+sslvyeA++r+rdPvyG++g i +lq+++ +l+++l l++
  Oeu059712.1  12 SCAACKLLKRRCTPTCQFAPYFRSDEPNKFAKVHKVFGASNVSKILNEVPEQQREDAVSSLVYEADVRLRDPVYGCIGAIASLQKKMVELQHDLILAR 109
                  6*******************************************************************************************998887 PP

       DUF260  99 e 99 
                  +
  Oeu059712.1 110 A 110
                  6 PP
Sequence ? help Back to Top
Protein Sequence    Length: 157 aa     Download sequence    
MKSHQEPRSG SSCAACKLLK RRCTPTCQFA PYFRSDEPNK FAKVHKVFGA SNVSKILNEV  60
PEQQREDAVS SLVYEADVRL RDPVYGCIGA IASLQKKMVE LQHDLILARA RLAYYVDQTV  120
LFSGDGVNMC PVIDMVEASN GQDCLSFDHF SQFPFP*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G11090.12e-61LBD family protein