PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Oeu059795.2
Organism
Olea europaea var. sylvestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea
Family Nin-like
Protein Properties Length: 223aa    MW: 25168.6 Da    PI: 9.034
Description Nin-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Oeu059795.2genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1RWP-RK51.51.9e-168332752
       RWP-RK 27 vclTvLKriCRqyGIkRWPhRkiksl 52
                 vc+T+LKriCRq+GI+RWP+Rki+++
  Oeu059795.2  8 VCPTTLKRICRQHGIRRWPSRKIEKV 33
                 9**********************997 PP
Sequence ? help Back to Top
Protein Sequence    Length: 223 aa     Download sequence    
MTILFFLVCP TTLKRICRQH GIRRWPSRKI EKVGHSLRKL QLVIDSVQGG DGSIQLSSFH  60
DDFPVLVYPN LPGNSHLSTS KMSDHFPHSS FCCSSGPKAK KISEHASIEP PPPLPKSRSQ  120
VFRDASNFRV KASFGEEKIR VSLQPNWGFK DLQQEIFRRY NIDDALKYLY DESEWVLLKC  180
NADLEECIDI HKSSRMHPNT LSINQSYQPS LGSSFGSSGG QF*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G76350.13e-39Nin-like family protein