PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Oeu060133.1
Organism
Olea europaea var. sylvestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea
Family MYB
Protein Properties Length: 253aa    MW: 28707 Da    PI: 5.9747
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Oeu060133.1genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding44.92.7e-141461148
                     TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
                     +g+W++eEd++l + ++ +G  +W++ +++ g+ R +k+c++rw +yl
      Oeu060133.1 14 KGAWSEEEDKKLREHIQSYGHSNWRLLPSYAGLARIGKSCRLRWVNYL 61
                     79********************************************97 PP
2Myb_DNA-binding41.92.3e-1367110146
                      TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS
  Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 
                      rg+ ++eE +l+ + +++lG++ W++Ia++++ gRt++ +k++w+ 
      Oeu060133.1  67 RGNYSKEEVDLIMEQHAKLGNK-WSAIAEKLP-GRTDNGIKNFWHA 110
                      899*******************.*********.***********85 PP
Sequence ? help Back to Top
Protein Sequence    Length: 253 aa     Download sequence    
MVKPCYVDSN GLKKGAWSEE EDKKLREHIQ SYGHSNWRLL PSYAGLARIG KSCRLRWVNY  60
LKPGVKRGNY SKEEVDLIME QHAKLGNKWS AIAEKLPGRT DNGIKNFWHA HVEKRFKRNV  120
TRTSSLSEIS QEESASKDVV VAQSSSLQEL ENSVPFLNNT NCAAHDTACW DSVEGTLWTE  180
PSQPNYIESL RELNYDELLS PNPYILSPYY YLPKDSSNSS DAVAETQENL RIEPGGLFSS  240
YFLFSDDTIN LF*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G31180.12e-53MYB family protein