PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Oeu060305.1
Organism
Olea europaea var. sylvestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea
Family NF-YA
Protein Properties Length: 162aa    MW: 18065.3 Da    PI: 10.0412
Description NF-YA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Oeu060305.1genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1CBFB_NFYA101.58.2e-3269125158
    CBFB_NFYA   1 deplYVNaKQyqrIlkRRqkRakleeekkldeksrkpylheSRhkhAlrRpRgsgGrF 58 
                  +ep++VNaKQy++I++RRq+Rak+e e+k  +ksrkpylheSRh hAlrR+Rg gGrF
  Oeu060305.1  69 EEPVFVNAKQYHGIMRRRQSRAKAELESKA-AKSRKPYLHESRHLHALRRARGMGGRF 125
                  69****************************.**************************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 162 aa     Download sequence    
MHYASPALGV GNAMAQTAYP YPDPYYRSIF SPYDTPPYPS QPYPSQPMVH LQLMGIQQAG  60
VPLPSDAVEE PVFVNAKQYH GIMRRRQSRA KAELESKAAK SRKPYLHESR HLHALRRARG  120
MGGRFQKKNE NQQKEVQSGD QSQANINLNL EKNAPTSSES A*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G30500.25e-46NF-YA family protein