PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Oeu060562.1
Organism
Olea europaea var. sylvestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea
Family SBP
Protein Properties Length: 140aa    MW: 15744.8 Da    PI: 9.7663
Description SBP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Oeu060562.1genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SBP127.64.7e-4040115277
                  -SSTT-----TT--HHHHHTT--HHHHT-S-EEETTEEEEE-TTTSSEEETTT--SS--S-STTTT-------S-- CS
          SBP   2 CqvegCeadlseakeyhrrhkvCevhskapvvlvsgleqrfCqqCsrfhelsefDeekrsCrrrLakhnerrrkkq 77 
                  C v++Ce+dl  +k+y++rhkvCe+hskap+v+vsg++qrfCqqCsrfhe+sefD++krsCr+rLa+hnerrr+++
  Oeu060562.1  40 CVVDKCEVDLRGCKKYYQRHKVCEIHSKAPEVIVSGVRQRFCQQCSRFHEVSEFDQTKRSCRTRLAGHNERRRQSS 115
                  9************************************************************************986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 140 aa     Download sequence    
MEDFKESNLT KERFNLGGGG GITGMSAQVG AGGGVAQPWC VVDKCEVDLR GCKKYYQRHK  60
VCEIHSKAPE VIVSGVRQRF CQQCSRFHEV SEFDQTKRSC RTRLAGHNER RRQSSSRLMK  120
RAQTSQDSRT ESRELNGFL*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G15270.13e-35SBP family protein