PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Oeu060662.1
Organism
Olea europaea var. sylvestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea
Family C3H
Protein Properties Length: 160aa    MW: 17892.2 Da    PI: 8.9186
Description C3H family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Oeu060662.1genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-CCCH34.72.9e-116082527
                 --SGGGGTS--TTTTT-SS-SSS CS
      zf-CCCH  5 lCrffartGtCkyGdrCkFaHgp 27
                  C++f+rtG C+yGd+Ck+ H++
  Oeu060662.1 60 VCNRFLRTGSCQYGDSCKYYHPK 82
                 6********************96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 160 aa     Download sequence    
MPLGKYYCDY CDKQFQDTPF ARRRHIQGVH HQRAKALWYD SLRSQNLAQI HDPDSVGKGV  60
CNRFLRTGSC QYGDSCKYYH PKQNVPSINT QGLAGTSFMK NVGQEGISRT QLDGEASMPG  120
KYYSTMLRNQ MGTSVGNLPP SLWPPPEGGY PPLPFVDWG*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G26749.15e-30C3H family protein