PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Oeu060780.1

Organism

Olea europaea var. sylvestris

Taxonomic ID

158386

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea

Family

WRKY

Protein Properties

Length: 530aa MW: 56865.4 Da PI: 7.0223

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Oeu060780.1	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	95.2	4.5e-30	237	296	1	59
---SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 ++Dg++WrKYGqK kg+++pr+YYrCt a +Cpv+k+v+r+a+d +++++tYeg+Hnh+ Oeu060780.1 237 MNDGCQWRKYGQKIAKGNPCPRAYYRCTVApSCPVRKQVQRCADDMSLLVTTYEGTHNHP 296 58*************************99**************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 530 aa Download sequence
MRKSVTGGKV KEENKAETSS EDKGCKEDVL QGPILTKIEI TSAETDSMAS SSAKKDQDDH 60 QLELAKAEIG EVIGENQRLR MCLDRILKDY RNLQMQYQDV VRQDAAKKST SSVQDTEEES 120 AELISLSLGM SSSDHFAKRD GFSKMSKKEK VGEKLEKQGI LDLGMDCKLE VPPVEPSPVV 180 SPGTSVEGIK EETAGENFPP HSMQKSIVRN GDDELSQQNP AKRARVSVRV RCDTPTMNDG 240 CQWRKYGQKI AKGNPCPRAY YRCTVAPSCP VRKQVQRCAD DMSLLVTTYE GTHNHPLSVS 300 ATAMASTTSA AASMLMSDSS TSGSSGATSS SPLTTNCVNL NGHNFHLSDN SRSKPFYPPN 360 SSHSSSTSYP TLTLDLTSNT ASARLGNFPP RYSTTNLNFS SLESNALPIS WSNGFLSYGN 420 PPYNKNQTGP LSFGSHPQEI LYQSYLQKNL NPTQQSLPPD TIAAATKAIT SDPSFQSALA 480 AALTSIIGSG GATSSTAGNQ TVEAGGTLST AQFSHGFFLV LNSSGKGMM*

Sequence ? help Back to Top

Protein Sequence Length: 530 aa Download sequence

MRKSVTGGKV KEENKAETSS EDKGCKEDVL QGPILTKIEI TSAETDSMAS SSAKKDQDDH  60
QLELAKAEIG EVIGENQRLR MCLDRILKDY RNLQMQYQDV VRQDAAKKST SSVQDTEEES  120
AELISLSLGM SSSDHFAKRD GFSKMSKKEK VGEKLEKQGI LDLGMDCKLE VPPVEPSPVV  180
SPGTSVEGIK EETAGENFPP HSMQKSIVRN GDDELSQQNP AKRARVSVRV RCDTPTMNDG  240
CQWRKYGQKI AKGNPCPRAY YRCTVAPSCP VRKQVQRCAD DMSLLVTTYE GTHNHPLSVS  300
ATAMASTTSA AASMLMSDSS TSGSSGATSS SPLTTNCVNL NGHNFHLSDN SRSKPFYPPN  360
SSHSSSTSYP TLTLDLTSNT ASARLGNFPP RYSTTNLNFS SLESNALPIS WSNGFLSYGN  420
PPYNKNQTGP LSFGSHPQEI LYQSYLQKNL NPTQQSLPPD TIAAATKAIT SDPSFQSALA  480
AALTSIIGSG GATSSTAGNQ TVEAGGTLST AQFSHGFFLV LNSSGKGMM*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G15130.1	9e-50	WRKY family protein