PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Oeu060931.1

Organism

Olea europaea var. sylvestris

Taxonomic ID

158386

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea

Family

HD-ZIP

Protein Properties

Length: 280aa MW: 31522.3 Da PI: 7.2002

Description

HD-ZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Oeu060931.1	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	54.9	1.5e-17	77	129	4	56
-SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS Homeobox 4 RttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 + +++ eq+++Le+ Fe +++ e++ +LA+ lgL+ rq+ +WFqNrRa++k Oeu060931.1 77 KKRLKLEQVKALEKSFELGNKLEPERKMHLARALGLQPRQIAIWFQNRRARWK 129 4557889*********************************************9 PP
2	HD-ZIP_I/II	126.4	1.3e-40	75	166	1	92
HD-ZIP_I/II 1 ekkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreelk 92 ekk+rl+ eqvk+LE+sFe +kLeperK++lar+Lglqprq+a+WFqnrRAR+ktkqlEkdy+ Lkr+++alk++n++L++++++L++el+ Oeu060931.1 75 EKKKRLKLEQVKALEKSFELGNKLEPERKMHLARALGLQPRQIAIWFQNRRARWKTKQLEKDYDILKRQFQALKADNDNLKTQNRKLQSELM 166 69**************************************************************************************9997 PP

Sequence ? help Back to Top
Protein Sequence Length: 280 aa Download sequence
MAFVPAASES MFPSHEDSHL ASITRGGFSS SCDPQDFHGV SQFLMRRSMS FSGLDRSEEV 60 PMDDDMSDDG SQLGEKKKRL KLEQVKALEK SFELGNKLEP ERKMHLARAL GLQPRQIAIW 120 FQNRRARWKT KQLEKDYDIL KRQFQALKAD NDNLKTQNRK LQSELMVLKN REPTGPPINL 180 NKENECSRSN GSENSRDINL VTTKTTLAAD GKLYSHPSNK LIFPSSTGPT SLTQLLQSSS 240 RGPDLHQGHK IDQTATNEGI CNVFSGIDEN PDFWAWPEE*

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	124	132	RRARWKTKQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G69780.1	5e-71	HD-ZIP family protein