PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Oeu060936.1
Organism
Olea europaea var. sylvestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea
Family bHLH
Protein Properties Length: 92aa    MW: 10371.7 Da    PI: 8.5214
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Oeu060936.1genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH19.12.3e-0622581854
                 HHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHH CS
          HLH 18 safeeLrellPk.askapskKlsKaeiLekAveYIksL 54
                 +  ++L++llP+ +   +s K s   +L+++++YI+sL
  Oeu060936.1 22 ELVSKLQQLLPEiR-DRRSNKASANKVLQETCNYIRSL 58
                 56689*******66.77888888888**********99 PP
Sequence ? help Back to Top
Protein Sequence    Length: 92 aa     Download sequence    
MSSRRSRQST SSSRITDDQI IELVSKLQQL LPEIRDRRSN KASANKVLQE TCNYIRSLHR  60
EVDDLSERLS QLLSTIDADS PEAGIIRSLI M*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G28857.12e-33bHLH family protein