PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Oeu061017.1
Organism
Olea europaea var. sylvestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea
Family HD-ZIP
Protein Properties Length: 192aa    MW: 22317.9 Da    PI: 4.5774
Description HD-ZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Oeu061017.1genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox60.52.7e-19657556
                 SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS
     Homeobox  5 ttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56
                  +f++eq++ Le+ F+  +++  ++ +++A+ lgL+ rqV +WFqN+Ra++k
  Oeu061017.1  6 KRFSDEQIKSLESIFKLGSKLEPSKTQQIARDLGLQPRQVAIWFQNKRARWK 57
                 58*************************************************9 PP
2HD-ZIP_I/II117.57.5e-38594392
  HD-ZIP_I/II  3 krrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreelk 92
                  +r+s+eq+k+LE+ F+  +kLep++ +++ar+Lglqprqva+WFqn+RAR+k+kqlE+dy++Lk++yd l  + e+L +e+++L+ +++
  Oeu061017.1  5 AKRFSDEQIKSLESIFKLGSKLEPSKTQQIARDLGLQPRQVAIWFQNKRARWKSKQLEQDYKVLKANYDDLYMKFESLMREKQSLQMQVS 94
                 69************************************************************************************9875 PP
Sequence ? help Back to Top
Protein Sequence    Length: 192 aa     Download sequence    
MSRNAKRFSD EQIKSLESIF KLGSKLEPSK TQQIARDLGL QPRQVAIWFQ NKRARWKSKQ  60
LEQDYKVLKA NYDDLYMKFE SLMREKQSLQ MQVSYSFAFS LFQILQQLKN LLENPLDENA  120
EYKEIPGFPN SEQKDPNGVI HADDEEKISN HFGQEEEGDS SPLASTETWC NLCSDDLFDQ  180
SCDTSNWWET V*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G46680.21e-36HD-ZIP family protein