PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Oeu061210.1

Organism

Olea europaea var. sylvestris

Taxonomic ID

158386

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea

Family

bHLH

Protein Properties

Length: 447aa MW: 49390.8 Da PI: 5.7579

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Oeu061210.1	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	28.1	3.6e-09	256	303	4	55
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 +h+ +Er RR++i +++ L+ l+P + sk Ka +L + ++Y++sLq Oeu061210.1 256 SHSLAERVRREKISEKMKYLQGLVPGC----SKITGKAGMLDEIINYVQSLQ 303 8************************....899***************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 447 aa Download sequence
MNRGALPEMI HCLTIPANIF AGNNGGAGME MSVLQLQQMN MKWKQQSDTH LNEDYQLSVF 60 SEPAVQDQQF KGLVEGDQGI GELVAQAMKP DPGIEDGRNE FGRAENSLNY ASFVYGNGSE 120 FEMNYAIPRT ASCPPAVAEA MAEAAAVAKK EKEAALQEKF CSAAGRESFK KRKSYKTRDL 180 KVVAEEQNRE KKAKGCVEEE DSKITEQNSK SKSTTTSSNN NKEISANNSN GNSKLSQIPK 240 PDYIHVRARR GQATDSHSLA ERVRREKISE KMKYLQGLVP GCSKITGKAG MLDEIINYVQ 300 SLQRQVEFLS MKLAAINPSL EFDIENFIAK EMFPANTSKF PTIGVSSDVI NPSHLQFNSL 360 SQGISCYGLE MGVNPPDVML RRTISAPVSM PETLLESFYL NQIQHSTLDP ELQNLYGMEF 420 HQGKSTSFNT QPFTGFMEAG DVKLEM*

Sequence ? help Back to Top

Protein Sequence Length: 447 aa Download sequence

MNRGALPEMI HCLTIPANIF AGNNGGAGME MSVLQLQQMN MKWKQQSDTH LNEDYQLSVF  60
SEPAVQDQQF KGLVEGDQGI GELVAQAMKP DPGIEDGRNE FGRAENSLNY ASFVYGNGSE  120
FEMNYAIPRT ASCPPAVAEA MAEAAAVAKK EKEAALQEKF CSAAGRESFK KRKSYKTRDL  180
KVVAEEQNRE KKAKGCVEEE DSKITEQNSK SKSTTTSSNN NKEISANNSN GNSKLSQIPK  240
PDYIHVRARR GQATDSHSLA ERVRREKISE KMKYLQGLVP GCSKITGKAG MLDEIINYVQ  300
SLQRQVEFLS MKLAAINPSL EFDIENFIAK EMFPANTSKF PTIGVSSDVI NPSHLQFNSL  360
SQGISCYGLE MGVNPPDVML RRTISAPVSM PETLLESFYL NQIQHSTLDP ELQNLYGMEF  420
HQGKSTSFNT QPFTGFMEAG DVKLEM*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G34530.1	1e-51	bHLH family protein