PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Oeu061297.3
Organism
Olea europaea var. sylvestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea
Family bHLH
Protein Properties Length: 277aa    MW: 31433.4 Da    PI: 6.2578
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Oeu061297.3genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH31.53.1e-10154201455
                  HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
          HLH   4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                  +h+ +Er RR++iN+++  L++++P +     k +  a++Lek ++Y++sLq
  Oeu061297.3 154 SHSLAERVRREKINDRLRCLQDIVPGC----YKTMGMAMMLEKIINYVHSLQ 201
                  8*************************9....356999**************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 277 aa     Download sequence    
MADYYLQNIQ KSFPSSDINS NMEFMNNFPE INPIYQDTSI LNLQNLMGFP SDNIFPELIN  60
ECTGISEDFP SLFIHEEKNL VPQTANDHRA GKKRKEIDTP QSSGAYSSAQ GSANVDTRKN  120
CAGKGKKVKL NEKEEEKPKD VVHVRAKRGQ ATDSHSLAER VRREKINDRL RCLQDIVPGC  180
YKTMGMAMML EKIINYVHSL QSQVEFLSMK LTVASTFYDF NSETDTFEAM QQAKECQALK  240
MQKMEKEGYE GIASSQFGPL DHGFGNYPSW QWPRNT*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
192129KKRKEIDTPQSSGAYSSAQGSANVDTRKNCAGKGKKVK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G18400.16e-55bHLH family protein