PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Oeu061339.1

Organism

Olea europaea var. sylvestris

Taxonomic ID

158386

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea

Family

TCP

Protein Properties

Length: 431aa MW: 47197.1 Da PI: 7.0962

Description

TCP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Oeu061339.1	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCP	107.2	2.6e-33	33	149	2	89
TCP 2 agkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgt...............ssssasec.eaesssssas 83 +g+kdrhsk++T++g+RdRRvRl a++a++f+d+qd+LGfd++sk+++WL+++a++ai+el+++ +++++ + +++++++s Oeu061339.1 33 TGRKDRHSKVCTSKGPRDRRVRLAAHTAIQFYDVQDRLGFDRPSKAVDWLIKKAQAAIDELAQLpawkpttgssveasfKQDAQ-KLfDENHQQQS-- 127 79**************************************************************66666443322222111111.11211111111.. PP TCP 84 nsssg....................k 89 + Oeu061339.1 128 ----QrqmdiniagpsskramrmlgG 149 ....1122223444443333333331 PP

Sequence ? help Back to Top
Protein Sequence Length: 431 aa Download sequence
MGENSHHRQM LSRLRNTGGE IVEVQGGHII RSTGRKDRHS KVCTSKGPRD RRVRLAAHTA 60 IQFYDVQDRL GFDRPSKAVD WLIKKAQAAI DELAQLPAWK PTTGSSVEAS FKQDAQKLFD 120 ENHQQQSQRQ MDINIAGPSS KRAMRMLGGE SEQQGLHQRE TANPNSNLNA SFLPPSLDSD 180 VIADTIKSLF PMGASAEASS SAMQFQNFGT SDLLSRTNSH SQDLRLSLQS FQDPILLHHH 240 NQQQPQQHQN PIHHNEQTHV QSQAQILLSG TPLGFDGTAA WSEQLQQMSE ISRFQRLPAW 300 NASGDTVTGS GGAAIYSFNS PSVPQPLLQQ LLVQNQFLSQ RGPLQSSNSP SIRAWMDPSA 360 GSIATTDHSQ QLQNHPAVFP IYPSSLPGIG FASGVGGFSG FHIPTRIQGD EEEHDGYSDK 420 PSSASSDSRH *

Sequence ? help Back to Top

Protein Sequence Length: 431 aa Download sequence

MGENSHHRQM LSRLRNTGGE IVEVQGGHII RSTGRKDRHS KVCTSKGPRD RRVRLAAHTA  60
IQFYDVQDRL GFDRPSKAVD WLIKKAQAAI DELAQLPAWK PTTGSSVEAS FKQDAQKLFD  120
ENHQQQSQRQ MDINIAGPSS KRAMRMLGGE SEQQGLHQRE TANPNSNLNA SFLPPSLDSD  180
VIADTIKSLF PMGASAEASS SAMQFQNFGT SDLLSRTNSH SQDLRLSLQS FQDPILLHHH  240
NQQQPQQHQN PIHHNEQTHV QSQAQILLSG TPLGFDGTAA WSEQLQQMSE ISRFQRLPAW  300
NASGDTVTGS GGAAIYSFNS PSVPQPLLQQ LLVQNQFLSQ RGPLQSSNSP SIRAWMDPSA  360
GSIATTDHSQ QLQNHPAVFP IYPSSLPGIG FASGVGGFSG FHIPTRIQGD EEEHDGYSDK  420
PSSASSDSRH *

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G15030.2	7e-77	TCP family protein