PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Oeu061426.1
Organism
Olea europaea var. sylvestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea
Family LBD
Protein Properties Length: 213aa    MW: 23331.5 Da    PI: 7.9629
Description LBD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Oeu061426.1genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF260126.31.5e-39141151101
       DUF260   1 aCaaCkvlrrkCakdCvlapyfpaeq.pkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkaelall 97 
                  +C aCk+lrrkCa+dC++apyf++eq p++fa++hk+FGasnv+kll ++p  +r +a+ +++yeA+ar+rdPvyG+v++i++lqqq++ l+a+l ++
  Oeu061426.1  14 PCGACKFLRRKCAADCIFAPYFCSEQgPARFAAIHKVFGASNVSKLLLHIPVADRCEAVVTIAYEAQARIRDPVYGCVSHIFALQQQVAYLQAQLMQV 111
                  7*************************99********************************************************************99 PP

       DUF260  98 keel 101
                  k++l
  Oeu061426.1 112 KAQL 115
                  9875 PP
Sequence ? help Back to Top
Protein Sequence    Length: 213 aa     Download sequence    
MATGTGTGTG TGTPCGACKF LRRKCAADCI FAPYFCSEQG PARFAAIHKV FGASNVSKLL  60
LHIPVADRCE AVVTIAYEAQ ARIRDPVYGC VSHIFALQQQ VAYLQAQLMQ VKAQLAQNLI  120
ESRNQENQWP GCNINGGMAS SFQNFPTNYM NSSSISPQSS LDSIDHHHGN ISMQDFESIR  180
DEVTLQPYCS KKRHSQTDLS ELQALALRMM KH*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G42430.13e-56LBD family protein